G2302913


Basic Information

Item Value
gene id G2302913
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 18355849 ~ 18358238 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2634389
cagctcggggatttgaacttgcaaactttcGATTAcgagtccaacgctttaaccactaggctaccctgccgccccactaatttgaaggggtgtccacatatatatatttatatagtgtatgtataggggtaaggtcactaggcatcaggatacagtggcttgcgaaagtattcacccccttggcattttttctattttgttgcgttacaatcTGGAattgtttgtatcatttgatttacacaacatgactaccactttgaagatgcaaaatatgttttattgtgaaacacacaagaaataagacaaaaaaacagaaaagttgagcatgcataactattcaccccctcaaagtcaatactttgcagatccaccttttgcagcaattacagctgcaagtctcttggggtatgtctctataagcttggcacatctagccactggaatttttgcccattcttcaaggcaaaactgctccagctccttcaagttggatgggttccgctggtgtacagcaatctttaagtcataccacagattctcaattggattgaggtctgggctttgactaggcaattccaagacatttaaatgttaccCCTTAAACCACTCGGGTGTTGCTTTGTTGactgaacctccgtcccagtctcaaatctctggaagactgaaacaggtctctcaagaatttccctgtatttagcgccatccatcattccttcaattctgaccagtttcccagtccccgccgatgctgccaccacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2634389 True 759 lncRNA 0.43 2 18355849 18358238

Neighbor

gene id symbol gene type direction distance location
LOC110489398 LOC106570447 coding upstream 122949 17862429 ~ 18232900 (+)
LOC110488037 LOC106570446 coding upstream 543495 17787777 ~ 17812354 (+)
LOC110488036 LOC106570445 coding upstream 571253 17763006 ~ 17784596 (+)
clcc1 LOC106570443 coding upstream 642628 17704489 ~ 17713221 (+)
pex1 pex1 coding upstream 934337 17393354 ~ 17421512 (+)
LOC110488042 LOC106570416 coding downstream 190715 18548953 ~ 18557288 (+)
LOC110488043 LOC106588968 coding downstream 248958 18607196 ~ 18669361 (+)
LOC100170213 LOC100170213 coding downstream 362754 18720992 ~ 18732451 (+)
si:ch211-80h18.1 LOC100499602 coding downstream 383459 18741697 ~ 18768506 (+)
LOC110488045 LOC106570423 coding downstream 445480 18803718 ~ 18962860 (+)
G2302854 NA non-coding upstream 75306 18278172 ~ 18280543 (+)
G2302813 NA non-coding upstream 159918 18195721 ~ 18195931 (+)
G2302812 NA non-coding upstream 161234 18194407 ~ 18194615 (+)
G2302809 NA non-coding upstream 167305 18188337 ~ 18188544 (+)
G2302807 NA non-coding upstream 171859 18183776 ~ 18183990 (+)
G2302931 NA non-coding downstream 17934 18376172 ~ 18376665 (+)
G2302939 NA non-coding downstream 33011 18391249 ~ 18391470 (+)
G2302957 NA non-coding downstream 67967 18426205 ~ 18426445 (+)
G2302958 NA non-coding downstream 70836 18429074 ~ 18429319 (+)
G2303752 NA non-coding downstream 235428 18593666 ~ 18593882 (+)
G2301841 NA other upstream 1162732 17186565 ~ 17193117 (+)
LOC110488022 tfpi2 other upstream 1521464 16827065 ~ 16834652 (+)
LOC110488019 LOC106570458 other upstream 1567310 16785333 ~ 16788539 (+)
G2301522 LOC106570460 other upstream 1679178 16669607 ~ 16693934 (+)
LOC110488017 LOC106570464 other upstream 1716208 16603599 ~ 16639641 (+)
G2303854 hsf1b other downstream 419107 18777345 ~ 18783027 (+)
LOC110488049 recql4 other downstream 643104 18998633 ~ 19016439 (+)
dgat1a LOC106570407 other downstream 995973 19354178 ~ 19379095 (+)
G2304678 NA other downstream 1469979 19828217 ~ 19829961 (+)
G2305956 NA other downstream 2195095 20553333 ~ 20553684 (+)

Expression


Co-expression Network