G2302939


Basic Information

Item Value
gene id G2302939
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 18391249 ~ 18391470 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2634415
gaagtttttttgacccaatggaggaacgtagtcagagaaatgctgatgaatgtcttgctcaagcTGTGTCTGTAACTGGTTcccctctgatgctcacaggcaatgtgtattggaagagatttctgaatgttcttcgcccagcatacacccctccaaccagacatgctttatatactcatttgctggatgcagagttcaacagcgttcaagtgaaggtcaagc

Function

NR:

description
PREDICTED: uncharacterized protein LOC107675252

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2634415 True 222 lncRNA 0.45 1 18391249 18391470

Neighbor

gene id symbol gene type direction distance location
LOC110489398 LOC106570447 coding upstream 158349 17862429 ~ 18232900 (+)
LOC110488037 LOC106570446 coding upstream 578895 17787777 ~ 17812354 (+)
LOC110488036 LOC106570445 coding upstream 606653 17763006 ~ 17784596 (+)
clcc1 LOC106570443 coding upstream 678028 17704489 ~ 17713221 (+)
pex1 pex1 coding upstream 969737 17393354 ~ 17421512 (+)
LOC110488042 LOC106570416 coding downstream 157483 18548953 ~ 18557288 (+)
LOC110488043 LOC106588968 coding downstream 215726 18607196 ~ 18669361 (+)
LOC100170213 LOC100170213 coding downstream 329522 18720992 ~ 18732451 (+)
si:ch211-80h18.1 LOC100499602 coding downstream 350227 18741697 ~ 18768506 (+)
LOC110488045 LOC106570423 coding downstream 412248 18803718 ~ 18962860 (+)
G2302882 NA non-coding upstream 5329 18317805 ~ 18385920 (+)
G2302931 NA non-coding upstream 14584 18376172 ~ 18376665 (+)
G2302913 NA non-coding upstream 33011 18355849 ~ 18358238 (+)
G2302854 NA non-coding upstream 110706 18278172 ~ 18280543 (+)
G2302813 NA non-coding upstream 195318 18195721 ~ 18195931 (+)
G2302957 NA non-coding downstream 34735 18426205 ~ 18426445 (+)
G2302958 NA non-coding downstream 37604 18429074 ~ 18429319 (+)
G2303752 NA non-coding downstream 202196 18593666 ~ 18593882 (+)
G2303758 NA non-coding downstream 206552 18598022 ~ 18598294 (+)
G2303763 NA non-coding downstream 212186 18603656 ~ 18603969 (+)
G2301841 NA other upstream 1198132 17186565 ~ 17193117 (+)
LOC110488022 tfpi2 other upstream 1556864 16827065 ~ 16834652 (+)
LOC110488019 LOC106570458 other upstream 1602710 16785333 ~ 16788539 (+)
G2301522 LOC106570460 other upstream 1714578 16669607 ~ 16693934 (+)
LOC110488017 LOC106570464 other upstream 1751608 16603599 ~ 16639641 (+)
G2303854 hsf1b other downstream 385875 18777345 ~ 18783027 (+)
LOC110488049 recql4 other downstream 609872 18998633 ~ 19016439 (+)
dgat1a LOC106570407 other downstream 962741 19354178 ~ 19379095 (+)
G2304678 NA other downstream 1436747 19828217 ~ 19829961 (+)
G2305956 NA other downstream 2161863 20553333 ~ 20553684 (+)

Expression


Co-expression Network