Gene
RNA
| Item | Value |
|---|---|
| gene id | G2303763 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 18603656 ~ 18603969 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein EH28_21996 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2635351 | True | 314 | lncRNA | 0.41 | 1 | 18603656 | 18603969 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488042 | LOC106570416 | coding | upstream | 46368 | 18548953 ~ 18557288 (+) |
| ctnnal1 | LOC106588976 | coding | upstream | 154503 | 18324517 ~ 18449153 (+) |
| LOC110489398 | LOC106570447 | coding | upstream | 370756 | 17862429 ~ 18232900 (+) |
| LOC110488037 | LOC106570446 | coding | upstream | 791302 | 17787777 ~ 17812354 (+) |
| LOC110488036 | LOC106570445 | coding | upstream | 819060 | 17763006 ~ 17784596 (+) |
| LOC110488043 | LOC106588968 | coding | downstream | 3227 | 18607196 ~ 18669361 (+) |
| LOC100170213 | LOC100170213 | coding | downstream | 117023 | 18720992 ~ 18732451 (+) |
| si:ch211-80h18.1 | LOC100499602 | coding | downstream | 137728 | 18741697 ~ 18768506 (+) |
| LOC110488045 | LOC106570423 | coding | downstream | 199749 | 18803718 ~ 18962860 (+) |
| LOC110488049 | recql4 | coding | downstream | 394664 | 18998633 ~ 19016439 (+) |
| G2303758 | NA | non-coding | upstream | 5362 | 18598022 ~ 18598294 (+) |
| G2303752 | NA | non-coding | upstream | 9774 | 18593666 ~ 18593882 (+) |
| G2302958 | NA | non-coding | upstream | 174337 | 18429074 ~ 18429319 (+) |
| G2302957 | NA | non-coding | upstream | 177211 | 18426205 ~ 18426445 (+) |
| G2302939 | NA | non-coding | upstream | 212186 | 18391249 ~ 18391470 (+) |
| G2303845 | NA | non-coding | downstream | 145642 | 18749611 ~ 18750729 (+) |
| G2303768 | NA | non-coding | downstream | 164685 | 18768654 ~ 18800607 (+) |
| G2303776 | NA | non-coding | downstream | 183265 | 18787234 ~ 18790181 (+) |
| G2303892 | NA | non-coding | downstream | 238401 | 18842370 ~ 18842677 (+) |
| G2301841 | NA | other | upstream | 1410539 | 17186565 ~ 17193117 (+) |
| LOC110488022 | tfpi2 | other | upstream | 1769271 | 16827065 ~ 16834652 (+) |
| LOC110488019 | LOC106570458 | other | upstream | 1815117 | 16785333 ~ 16788539 (+) |
| G2301522 | LOC106570460 | other | upstream | 1926985 | 16669607 ~ 16693934 (+) |
| LOC110488017 | LOC106570464 | other | upstream | 1964015 | 16603599 ~ 16639641 (+) |
| G2303854 | hsf1b | other | downstream | 173376 | 18777345 ~ 18783027 (+) |
| dgat1a | LOC106570407 | other | downstream | 750242 | 19354178 ~ 19379095 (+) |
| G2304678 | NA | other | downstream | 1224248 | 19828217 ~ 19829961 (+) |
| G2305956 | NA | other | downstream | 1949364 | 20553333 ~ 20553684 (+) |
