G2303967


Basic Information

Item Value
gene id G2303967
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 19018089 ~ 19018427 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2635627
cttgtaatcgttaaggactggtgGGTTTTACAGGATAAAAATAAAattaatggagctaagcacatgcaaaatcctagaggaaaacctggttcagtctgctttccaacagaaattgggagatgaattcacctttcagcaggacaataacctaaaatacaaggccaaatctacactggagttgcttaccaagaagacagtgaatgttcctaagtggctaagttacagttttgacttgaatctatggcaagacctgaaaatggttatcaagcaatgatcaacaaccaatttgacagagcttgaagaattttgagaagaataatgggcaaatattgaacaatc

Function

NR:

description
Transposable element Tcb1 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2635627 True 339 lncRNA 0.37 1 19018089 19018427

Neighbor

gene id symbol gene type direction distance location
LOC110488049 recql4 coding upstream 1675 18998633 ~ 19016439 (+)
LOC110488045 LOC106570423 coding upstream 55229 18803718 ~ 18962860 (+)
si:ch211-80h18.1 LOC100499602 coding upstream 249583 18741697 ~ 18768506 (+)
LOC100170213 LOC100170213 coding upstream 285638 18720992 ~ 18732451 (+)
LOC110488043 LOC106588968 coding upstream 348728 18607196 ~ 18669361 (+)
LOC110488050 LOC106570429 coding downstream 3948 19022375 ~ 19041121 (+)
scrt1a LOC106570411 coding downstream 101524 19119951 ~ 19124074 (+)
dgat1a LOC106570407 coding downstream 335751 19354178 ~ 19379095 (+)
trpn1 LOC106570405 coding downstream 366157 19384584 ~ 19429517 (+)
LOC110488054 LOC106570404 coding downstream 449403 19467830 ~ 19539008 (+)
G2303968 NA non-coding upstream 603 19016886 ~ 19017486 (+)
G2303980 NA non-coding upstream 32304 18985561 ~ 18985785 (+)
G2303963 NA non-coding upstream 48829 18969043 ~ 18969260 (+)
G2303892 NA non-coding upstream 175412 18842370 ~ 18842677 (+)
G2303990 NA non-coding downstream 10870 19029297 ~ 19029645 (+)
G2303957 NA non-coding downstream 22992 19041419 ~ 19043466 (+)
G2303995 NA non-coding downstream 36570 19054997 ~ 19055199 (+)
G2304285 NA non-coding downstream 37346 19055773 ~ 19056067 (+)
G2304286 NA non-coding downstream 37644 19056071 ~ 19056281 (+)
G2303854 hsf1b other upstream 235062 18777345 ~ 18783027 (+)
G2301841 NA other upstream 1824972 17186565 ~ 17193117 (+)
LOC110488022 tfpi2 other upstream 2183704 16827065 ~ 16834652 (+)
LOC110488019 LOC106570458 other upstream 2229550 16785333 ~ 16788539 (+)
G2304678 NA other downstream 809790 19828217 ~ 19829961 (+)
G2305956 NA other downstream 1534906 20553333 ~ 20553684 (+)
G2306173 LOC106570399 other downstream 1794762 20813189 ~ 20814298 (+)
LOC110488072 LOC106570395 other downstream 2289005 21307432 ~ 21311878 (+)

Expression


Co-expression Network