G2303957


Basic Information

Item Value
gene id G2303957
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 19041419 ~ 19043466 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2635614
cattgaatattttttggagcatggtgaagttattaattacactttggatgatgtatcaatacacccagtcactacaaagatacaggtgtccttcttagttgccagagaggaaggaaaccactcagggagtTCACAgtgaggccaatggtaactttaaaacagttacaatgGCTGTGACATAAGAAAactgatggatcaacaacattgtagttactccacaatagtaacctaattgacagagttaaaataaggaagcctgtacagaagacaaatattccaaaacatgcatcctatttgcaacaagacactaaagtaaaactgcaaaaaatgtggcaaagtgaggaactttatgtcctgaagacaaagtgttatgtttggggaaaatccaacaaaaCAAATCACGGAATAACACTTCATattttgaagcatggtggtagctgcatcatgttataggtatgcttgtcatcggtagAGGACAAGGGAGTGTTTTAtgataaaaaaagaaacagaatggagtgaagcacaggcaaaatcctagaagaaaaccagGTTCAGTctgacaaattcacctttcagcaggacaataaccttaaacacaaggccaaatctacactggatgtgcttaccaagatgacattgaaagttcctgagtggcctagttacagttttgacttaaatcagcttgaacatcaaatcaaatattactgtgaaatgctgaatacaacaggtgtagactttacagtgaaatgcttacttacaagcccttaaccaacaatgcagttcaagagaGTTAAgataatatttactaaataaactaaggtAAAAAAATtatgtaacacaagaaaatgacataacaataacgaggctatatacaggggatagcGATACCGAGTCAatatgtgggggtacaggttagtcgaggtattttgtatagtgactatgcatagataataaacagcgagtagcagcagtgtaagaaGAGAGGGGTCCTGGATATAGGTCTTGGatggtcctggatggtaggaagcttggccccagtgatgtactgagccgtacgcaataccctctgtagcgccttgaggtcagatgccgagcagttgccataccaggcggtgatgcaacgggtcaggatgttctcgatggtgcagctgtagaaccttttgaggttcTGGGGatccatgctaaatcttttcagtcttctgagggggaaaaggtgttgtcgtgccctcttcacaactatcttggtgtgtttggacaatgatagttcgttggtggacaccaaggaacttgaaactctcgactcaTTCCACAGGGGGCCTGTTCGGACCTTCTTTTCCTatggtccacgatcagctcctttgtcttgctcatattgagggagagtttgttgtcctggcaccacactgccatgtctctgacctcctttctataggctgtctcatcgttgtcggtgatcagactgttgtgtcgtcagcaaacttgatgatggtgctgtagtcgtgcttggccacgcagtcgtgggtgaacagggagtacaggaggggactgagcactcacccctgagaggccccagtGTTGGGGATCAGTgcggcagatgtgttgttgcctacccttaccacctgggggcggcccgtcaggaagtccaggatccagttgcagagggagatgtttagtcccagggtccttaacttagtgagGATCTTTGTGGGTAAtaaggtgttgaatgctgaactgtagtcaatgaacagccttcTCACATAGGtgatccttttgtccaggtgggaaagtgcagtgtggagtgcgattgagattgcgttatctgtggatctgttggggcggtatacgaattggagtgggtctagggtttccgacatgatggtgttgatgtgagccatgaccagcctttcaaacatCTATAGCAAGGCTTAAAAAAGGTTgtgtagcaatgatcaacaaccaacttgacagaattggaagaataaaaaataaataataataataataataataataataataaaaatattttagaatccaggtgtgcaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2635614 True 2048 lncRNA 0.43 1 19041419 19043466

Neighbor

gene id symbol gene type direction distance location
LOC110488050 LOC106570429 coding upstream 298 19022375 ~ 19041121 (+)
LOC110488049 recql4 coding upstream 25005 18998633 ~ 19016439 (+)
LOC110488045 LOC106570423 coding upstream 78559 18803718 ~ 18962860 (+)
si:ch211-80h18.1 LOC100499602 coding upstream 272913 18741697 ~ 18768506 (+)
LOC100170213 LOC100170213 coding upstream 308968 18720992 ~ 18732451 (+)
scrt1a LOC106570411 coding downstream 76485 19119951 ~ 19124074 (+)
dgat1a LOC106570407 coding downstream 310712 19354178 ~ 19379095 (+)
trpn1 LOC106570405 coding downstream 341118 19384584 ~ 19429517 (+)
LOC110488054 LOC106570404 coding downstream 424364 19467830 ~ 19539008 (+)
dennd3a dennd3 coding downstream 509724 19553190 ~ 19602824 (+)
G2303990 NA non-coding upstream 11774 19029297 ~ 19029645 (+)
G2303967 NA non-coding upstream 22992 19018089 ~ 19018427 (+)
G2303968 NA non-coding upstream 23933 19016886 ~ 19017486 (+)
G2303980 NA non-coding upstream 55634 18985561 ~ 18985785 (+)
G2303995 NA non-coding downstream 11531 19054997 ~ 19055199 (+)
G2304285 NA non-coding downstream 12307 19055773 ~ 19056067 (+)
G2304286 NA non-coding downstream 12605 19056071 ~ 19056281 (+)
G2304326 NA non-coding downstream 88539 19132005 ~ 19146170 (+)
G2304335 NA non-coding downstream 101590 19145056 ~ 19148210 (+)
G2303854 hsf1b other upstream 258392 18777345 ~ 18783027 (+)
G2301841 NA other upstream 1848302 17186565 ~ 17193117 (+)
LOC110488022 tfpi2 other upstream 2207034 16827065 ~ 16834652 (+)
LOC110488019 LOC106570458 other upstream 2252880 16785333 ~ 16788539 (+)
G2304678 NA other downstream 784751 19828217 ~ 19829961 (+)
G2305956 NA other downstream 1509867 20553333 ~ 20553684 (+)
G2306173 LOC106570399 other downstream 1769723 20813189 ~ 20814298 (+)
LOC110488072 LOC106570395 other downstream 2263966 21307432 ~ 21311878 (+)

Expression


Co-expression Network