Gene
RNA
| Item | Value |
|---|---|
| gene id | G2304585 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 19668174 ~ 19758204 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2636347 | True | 819 | lncRNA | 0.53 | 2 | 19668174 | 19758204 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dennd3a | dennd3 | coding | upstream | 65350 | 19553190 ~ 19602824 (+) |
| LOC110488054 | LOC106570404 | coding | upstream | 129166 | 19467830 ~ 19539008 (+) |
| trpn1 | LOC106570405 | coding | upstream | 238657 | 19384584 ~ 19429517 (+) |
| dgat1a | LOC106570407 | coding | upstream | 289079 | 19354178 ~ 19379095 (+) |
| scrt1a | LOC106570411 | coding | upstream | 544100 | 19119951 ~ 19124074 (+) |
| LOC118946534 | NA | coding | downstream | 19065 | 19777269 ~ 19780313 (+) |
| LOC118946489 | NA | coding | downstream | 235938 | 19994142 ~ 20001374 (+) |
| LOC118946542 | NA | coding | downstream | 956865 | 20715069 ~ 20719092 (+) |
| ccdc127b | ccdc127 | coding | downstream | 1444888 | 21203092 ~ 21205705 (+) |
| LOC110488068 | cfap69 | coding | downstream | 1464717 | 21222921 ~ 21231008 (+) |
| G2304491 | NA | non-coding | upstream | 212723 | 19454741 ~ 19455451 (+) |
| G2304434 | NA | non-coding | upstream | 323359 | 19335218 ~ 19344815 (+) |
| G2304399 | NA | non-coding | upstream | 391309 | 19273987 ~ 19276865 (+) |
| G2304335 | NA | non-coding | upstream | 519964 | 19145056 ~ 19148210 (+) |
| G2304575 | NA | non-coding | downstream | 26380 | 19784584 ~ 19788459 (+) |
| G2304658 | NA | non-coding | downstream | 35066 | 19793270 ~ 19793691 (+) |
| G2304659 | NA | non-coding | downstream | 35709 | 19793913 ~ 19795081 (+) |
| G2304703 | NA | non-coding | downstream | 124981 | 19883185 ~ 19924959 (+) |
| G2304816 | NA | non-coding | downstream | 302463 | 20060667 ~ 20061476 (+) |
| LOC110488049 | recql4 | other | upstream | 652581 | 18998633 ~ 19016439 (+) |
| G2303854 | hsf1b | other | upstream | 885147 | 18777345 ~ 18783027 (+) |
| G2301841 | NA | other | upstream | 2475057 | 17186565 ~ 17193117 (+) |
| LOC110488022 | tfpi2 | other | upstream | 2833789 | 16827065 ~ 16834652 (+) |
| G2304678 | NA | other | downstream | 70013 | 19828217 ~ 19829961 (+) |
| G2305956 | NA | other | downstream | 795129 | 20553333 ~ 20553684 (+) |
| G2306173 | LOC106570399 | other | downstream | 1054985 | 20813189 ~ 20814298 (+) |
| LOC110488072 | LOC106570395 | other | downstream | 1549228 | 21307432 ~ 21311878 (+) |
| G2306688 | NA | other | downstream | 1562419 | 21320623 ~ 21323896 (+) |
