G2304816


Basic Information

Item Value
gene id G2304816
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 20060667 ~ 20061476 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2636592
ggatagCTACCATTCTGTAGGTTtttatctccaaccctgttctggATAGCTACCattctgtaggttttaactccaaccctgttctggATAGCTACCattctgtaggttttaactccaaccctgttcctggatagCTACCattctgtaggttttaactccaaccctgttcctggatagCTAACATTCTGTAGGTtttatctccaaccctgttc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2636592 True 212 lncRNA 0.43 2 20060667 20061476

Neighbor

gene id symbol gene type direction distance location
LOC118946489 NA coding upstream 59293 19994142 ~ 20001374 (+)
ptk2aa LOC106570401 coding upstream 276228 19607978 ~ 19784439 (+)
LOC118946534 NA coding upstream 280354 19777269 ~ 19780313 (+)
dennd3a dennd3 coding upstream 457843 19553190 ~ 19602824 (+)
LOC110488054 LOC106570404 coding upstream 521659 19467830 ~ 19539008 (+)
LOC118946542 NA coding downstream 653593 20715069 ~ 20719092 (+)
ccdc127b ccdc127 coding downstream 1141616 21203092 ~ 21205705 (+)
LOC110488068 cfap69 coding downstream 1161445 21222921 ~ 21231008 (+)
LOC110488070 NA coding downstream 1171867 21233278 ~ 21238489 (+)
slc9a1b slc9a1 coding downstream 1198783 21260259 ~ 21274297 (+)
G2304703 NA non-coding upstream 135708 19883185 ~ 19924959 (+)
G2304659 NA non-coding upstream 265586 19793913 ~ 19795081 (+)
G2304658 NA non-coding upstream 266976 19793270 ~ 19793691 (+)
G2304575 NA non-coding upstream 272208 19784584 ~ 19788459 (+)
G2304585 NA non-coding upstream 302463 19668174 ~ 19758204 (+)
G2305932 NA non-coding downstream 478633 20540109 ~ 20540334 (+)
G2305934 NA non-coding downstream 479946 20541422 ~ 20541721 (+)
G2305935 NA non-coding downstream 480306 20541782 ~ 20541987 (+)
G2305940 NA non-coding downstream 483306 20544782 ~ 20545047 (+)
G2305955 NA non-coding downstream 491470 20552946 ~ 20553237 (+)
G2304678 NA other upstream 230706 19828217 ~ 19829961 (+)
dgat1a LOC106570407 other upstream 700878 19354178 ~ 19379095 (+)
LOC110488049 recql4 other upstream 1045074 18998633 ~ 19016439 (+)
G2303854 hsf1b other upstream 1277640 18777345 ~ 18783027 (+)
G2301841 NA other upstream 2867550 17186565 ~ 17193117 (+)
G2305956 NA other downstream 491857 20553333 ~ 20553684 (+)
G2306173 LOC106570399 other downstream 751713 20813189 ~ 20814298 (+)
LOC110488072 LOC106570395 other downstream 1245956 21307432 ~ 21311878 (+)
G2306688 NA other downstream 1259147 21320623 ~ 21323896 (+)
G2306825 NA other downstream 1525612 21587088 ~ 21587434 (+)

Expression


Co-expression Network