Gene
RNA
| Item | Value |
|---|---|
| gene id | G2305934 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 20541422 ~ 20541721 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2637834 | True | 300 | lncRNA | 0.38 | 1 | 20541422 | 20541721 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118946489 | NA | coding | upstream | 540048 | 19994142 ~ 20001374 (+) |
| ptk2aa | LOC106570401 | coding | upstream | 756983 | 19607978 ~ 19784439 (+) |
| LOC118946534 | NA | coding | upstream | 761109 | 19777269 ~ 19780313 (+) |
| dennd3a | dennd3 | coding | upstream | 938598 | 19553190 ~ 19602824 (+) |
| LOC110488054 | LOC106570404 | coding | upstream | 1002414 | 19467830 ~ 19539008 (+) |
| LOC118946542 | NA | coding | downstream | 173348 | 20715069 ~ 20719092 (+) |
| ccdc127b | ccdc127 | coding | downstream | 661371 | 21203092 ~ 21205705 (+) |
| LOC110488068 | cfap69 | coding | downstream | 681200 | 21222921 ~ 21231008 (+) |
| LOC110488070 | NA | coding | downstream | 691622 | 21233278 ~ 21238489 (+) |
| slc9a1b | slc9a1 | coding | downstream | 718538 | 21260259 ~ 21274297 (+) |
| G2305932 | NA | non-coding | upstream | 1088 | 20540109 ~ 20540334 (+) |
| G2304816 | NA | non-coding | upstream | 479946 | 20060667 ~ 20061476 (+) |
| G2304703 | NA | non-coding | upstream | 616463 | 19883185 ~ 19924959 (+) |
| G2304659 | NA | non-coding | upstream | 746341 | 19793913 ~ 19795081 (+) |
| G2304658 | NA | non-coding | upstream | 747731 | 19793270 ~ 19793691 (+) |
| G2305935 | NA | non-coding | downstream | 61 | 20541782 ~ 20541987 (+) |
| G2305940 | NA | non-coding | downstream | 3061 | 20544782 ~ 20545047 (+) |
| G2305955 | NA | non-coding | downstream | 11225 | 20552946 ~ 20553237 (+) |
| G2305967 | NA | non-coding | downstream | 17647 | 20559368 ~ 20559864 (+) |
| G2305974 | NA | non-coding | downstream | 23407 | 20565128 ~ 20565335 (+) |
| G2304678 | NA | other | upstream | 711461 | 19828217 ~ 19829961 (+) |
| dgat1a | LOC106570407 | other | upstream | 1181633 | 19354178 ~ 19379095 (+) |
| LOC110488049 | recql4 | other | upstream | 1525829 | 18998633 ~ 19016439 (+) |
| G2303854 | hsf1b | other | upstream | 1758395 | 18777345 ~ 18783027 (+) |
| G2301841 | NA | other | upstream | 3348305 | 17186565 ~ 17193117 (+) |
| G2305956 | NA | other | downstream | 11612 | 20553333 ~ 20553684 (+) |
| G2306173 | LOC106570399 | other | downstream | 271468 | 20813189 ~ 20814298 (+) |
| LOC110488072 | LOC106570395 | other | downstream | 765711 | 21307432 ~ 21311878 (+) |
| G2306688 | NA | other | downstream | 778902 | 21320623 ~ 21323896 (+) |
| G2306825 | NA | other | downstream | 1045367 | 21587088 ~ 21587434 (+) |
