G2306001


Basic Information

Item Value
gene id G2306001
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 20595856 ~ 20596061 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2637902
TCTAGAGTAGACCCTCTGCCCTACCCTACATGCCTGTACAGAGTAGACCCTCTATCCTACCCTCCAAGActgtatagagtagaccctcAATCCTACCTTCCAAgcctgtatagagtagaccctctatgCTACCCTCCAAGCCTGTAAAGTAGATCCTCCATCATACACCCTCCAAGCAtgtatagagtagaccctctaccctaccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2637902 True 206 lncRNA 0.50 1 20595856 20596061

Neighbor

gene id symbol gene type direction distance location
LOC118946489 NA coding upstream 594482 19994142 ~ 20001374 (+)
ptk2aa LOC106570401 coding upstream 811417 19607978 ~ 19784439 (+)
LOC118946534 NA coding upstream 815543 19777269 ~ 19780313 (+)
dennd3a dennd3 coding upstream 993032 19553190 ~ 19602824 (+)
LOC110488054 LOC106570404 coding upstream 1056848 19467830 ~ 19539008 (+)
LOC118946542 NA coding downstream 119008 20715069 ~ 20719092 (+)
ccdc127b ccdc127 coding downstream 607031 21203092 ~ 21205705 (+)
LOC110488068 cfap69 coding downstream 626860 21222921 ~ 21231008 (+)
LOC110488070 NA coding downstream 637282 21233278 ~ 21238489 (+)
slc9a1b slc9a1 coding downstream 664198 21260259 ~ 21274297 (+)
G2305993 NA non-coding upstream 16549 20578962 ~ 20579307 (+)
G2305978 NA non-coding upstream 27490 20568116 ~ 20568366 (+)
G2305974 NA non-coding upstream 30521 20565128 ~ 20565335 (+)
G2305967 NA non-coding upstream 35992 20559368 ~ 20559864 (+)
G2305955 NA non-coding upstream 42619 20552946 ~ 20553237 (+)
G2306051 NA non-coding downstream 35458 20631519 ~ 20631755 (+)
G2306059 NA non-coding downstream 41327 20637388 ~ 20637617 (+)
G2306087 NA non-coding downstream 83068 20679129 ~ 20679376 (+)
G2306092 NA non-coding downstream 90369 20686430 ~ 20686899 (+)
G2306108 NA non-coding downstream 115959 20712020 ~ 20712309 (+)
G2305956 NA other upstream 42172 20553333 ~ 20553684 (+)
G2304678 NA other upstream 765895 19828217 ~ 19829961 (+)
dgat1a LOC106570407 other upstream 1236067 19354178 ~ 19379095 (+)
LOC110488049 recql4 other upstream 1580263 18998633 ~ 19016439 (+)
G2303854 hsf1b other upstream 1812829 18777345 ~ 18783027 (+)
G2306173 LOC106570399 other downstream 217128 20813189 ~ 20814298 (+)
LOC110488072 LOC106570395 other downstream 711371 21307432 ~ 21311878 (+)
G2306688 NA other downstream 724562 21320623 ~ 21323896 (+)
G2306825 NA other downstream 991027 21587088 ~ 21587434 (+)
c32h5orf49 cssa14h5orf49 other downstream 1809956 22405971 ~ 22416346 (+)

Expression


Co-expression Network