G2306051


Basic Information

Item Value
gene id G2306051
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 20631519 ~ 20631755 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2637952
aaatcctacaatgtgattttctgatttttattcctcattttgtctgtcatagttgaagtgtacctatgatgaaaattacaggcctctctcatccttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgccccactgtacatttcgGCATGAATTGTCTTCATCAGAGCCTTGAGTAGGAAAAATGTGGGAGGCACCTATATACCCTCGCAGGGGAATGTCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2637952 True 237 lncRNA 0.41 1 20631519 20631755

Neighbor

gene id symbol gene type direction distance location
LOC118946489 NA coding upstream 630145 19994142 ~ 20001374 (+)
ptk2aa LOC106570401 coding upstream 847080 19607978 ~ 19784439 (+)
LOC118946534 NA coding upstream 851206 19777269 ~ 19780313 (+)
dennd3a dennd3 coding upstream 1028695 19553190 ~ 19602824 (+)
LOC110488054 LOC106570404 coding upstream 1092511 19467830 ~ 19539008 (+)
LOC118946542 NA coding downstream 83314 20715069 ~ 20719092 (+)
ccdc127b ccdc127 coding downstream 571337 21203092 ~ 21205705 (+)
LOC110488068 cfap69 coding downstream 591166 21222921 ~ 21231008 (+)
LOC110488070 NA coding downstream 601588 21233278 ~ 21238489 (+)
slc9a1b slc9a1 coding downstream 628504 21260259 ~ 21274297 (+)
G2306001 NA non-coding upstream 35458 20595856 ~ 20596061 (+)
G2305993 NA non-coding upstream 52212 20578962 ~ 20579307 (+)
G2305978 NA non-coding upstream 63153 20568116 ~ 20568366 (+)
G2305974 NA non-coding upstream 66184 20565128 ~ 20565335 (+)
G2305967 NA non-coding upstream 71655 20559368 ~ 20559864 (+)
G2306059 NA non-coding downstream 5633 20637388 ~ 20637617 (+)
G2306087 NA non-coding downstream 47374 20679129 ~ 20679376 (+)
G2306092 NA non-coding downstream 54675 20686430 ~ 20686899 (+)
G2306108 NA non-coding downstream 80265 20712020 ~ 20712309 (+)
G2305956 NA other upstream 77835 20553333 ~ 20553684 (+)
G2304678 NA other upstream 801558 19828217 ~ 19829961 (+)
dgat1a LOC106570407 other upstream 1271730 19354178 ~ 19379095 (+)
LOC110488049 recql4 other upstream 1615926 18998633 ~ 19016439 (+)
G2303854 hsf1b other upstream 1848492 18777345 ~ 18783027 (+)
G2306173 LOC106570399 other downstream 181434 20813189 ~ 20814298 (+)
LOC110488072 LOC106570395 other downstream 675677 21307432 ~ 21311878 (+)
G2306688 NA other downstream 688868 21320623 ~ 21323896 (+)
G2306825 NA other downstream 955333 21587088 ~ 21587434 (+)
c32h5orf49 cssa14h5orf49 other downstream 1774262 22405971 ~ 22416346 (+)

Expression


Co-expression Network