G2306692 (LOC100194703)


Basic Information

Item Value
gene id G2306692
gene name LOC100194703
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 21254840 ~ 21255203 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2638640
ccgagagcaacttctcccaaccatccaggaacagtttggtgacgaacaatgccttttccagcatgatggagtaccttgccataaggcaaaagtgataactaagtggctcggggaacaaaacatcgatattttgggtccatggccaggaaactccccagaccttaatcccattgagaacttgtggtcaatcctcaagaggcgggtggacaaacaaaaccccacaaattctgactaactccaagcattgattatgcaagaatgggctgccatcagtcaggatgtggcccagaagttaattgacagcatgcaaGGGCGGATTGGAGAGATCTTGAAAAAGaatggtcaacactgcaaatattgactc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2638640 True 364 lncRNA 0.46 1 21254840 21255203

Neighbor

gene id symbol gene type direction distance location
LOC110488070 NA coding upstream 16444 21233278 ~ 21238489 (+)
LOC110488068 cfap69 coding upstream 23832 21222921 ~ 21231008 (+)
ccdc127b ccdc127 coding upstream 49762 21203092 ~ 21205705 (+)
LOC118946542 NA coding upstream 535748 20715069 ~ 20719092 (+)
LOC118946489 NA coding upstream 1253466 19994142 ~ 20001374 (+)
slc9a1b slc9a1 coding downstream 5056 21260259 ~ 21274297 (+)
LOC110488071 LOC106570376 coding downstream 22362 21277565 ~ 21307347 (+)
LOC110488072 LOC106570395 coding downstream 52302 21307432 ~ 21311878 (+)
LOC110488073 NA coding downstream 57306 21312509 ~ 21320395 (+)
LOC100499586 LOC100499586 coding downstream 71718 21326921 ~ 21328722 (+)
G2306664 NA non-coding upstream 36430 21218207 ~ 21218410 (+)
G2306646 NA non-coding upstream 39974 21214620 ~ 21214866 (+)
G2306598 NA non-coding upstream 153238 21101312 ~ 21101602 (+)
G2306706 NA non-coding downstream 69109 21324312 ~ 21324772 (+)
LOC110489444 LOC105012574 non-coding downstream 80732 21334316 ~ 21337707 (+)
G2306687 NA non-coding downstream 99143 21354346 ~ 21354926 (+)
G2306685 NA non-coding downstream 99855 21355058 ~ 21356436 (+)
G2306716 NA non-coding downstream 101510 21356713 ~ 21356926 (+)
G2306173 LOC106570399 other upstream 440542 20813189 ~ 20814298 (+)
G2305956 NA other upstream 701156 20553333 ~ 20553684 (+)
G2304678 NA other upstream 1424879 19828217 ~ 19829961 (+)
dgat1a LOC106570407 other upstream 1895051 19354178 ~ 19379095 (+)
LOC110488049 recql4 other upstream 2239247 18998633 ~ 19016439 (+)
G2306688 NA other downstream 65420 21320623 ~ 21323896 (+)
G2306825 NA other downstream 331885 21587088 ~ 21587434 (+)
c32h5orf49 cssa14h5orf49 other downstream 1150814 22405971 ~ 22416346 (+)
G2308224 NA other downstream 1349117 22604320 ~ 22604721 (+)

Expression


Co-expression Network