G2306706


Basic Information

Item Value
gene id G2306706
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 21324312 ~ 21324772 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2638655
cgcagaccacgtgtatggcgttgtgtgggcgagtggttagctgatgtcaacattgtgaacagagtgccccatggtggcggtggggttatggtatgggcaggcataatctacagacaacgaacacaattgtattttatcgatggcaatttgaatgcagagataccgtgacgagatcctgaggcccattgtcgtgccattcatccgccgccatcacctcatgtttcagcatgataatgcactgccccatgtcacaaggatctgtacaccattcctggaagatgaaaatgacccagttcttccatggcctgcacactcaccagacatgtcactcattAATCATGTTTGCGATGATCTGTattgatgtgtacgacagcgtgttccagttcccgccaatatccagtaacttcgcacagccattgaagaggagtgggacaacattccacaggccacaatcataCCAc

Function

NR:

description
Transposable element Tcb2 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2638655 True 461 lncRNA 0.49 1 21324312 21324772

Neighbor

gene id symbol gene type direction distance location
LOC110488073 NA coding upstream 3917 21312509 ~ 21320395 (+)
LOC110488072 LOC106570395 coding upstream 14117 21307432 ~ 21311878 (+)
LOC110488071 LOC106570376 coding upstream 16965 21277565 ~ 21307347 (+)
slc9a1b slc9a1 coding upstream 50015 21260259 ~ 21274297 (+)
LOC110488070 NA coding upstream 85916 21233278 ~ 21238489 (+)
LOC100499586 LOC100499586 coding downstream 2149 21326921 ~ 21328722 (+)
LOC110489444 LOC105012574 coding downstream 9544 21334316 ~ 21337707 (+)
LOC110488075 LOC106570373 coding downstream 25179 21349951 ~ 21354244 (+)
LOC110488077 fhl3 coding downstream 33489 21358261 ~ 21388079 (+)
stpg1 stpg1 coding downstream 72548 21397320 ~ 21403121 (+)
G2306692 LOC100194703 non-coding upstream 69109 21254840 ~ 21255203 (+)
G2306664 NA non-coding upstream 105902 21218207 ~ 21218410 (+)
G2306646 NA non-coding upstream 109446 21214620 ~ 21214866 (+)
ccdc127b ccdc127 non-coding upstream 118607 21203092 ~ 21205705 (+)
G2306687 NA non-coding downstream 29574 21354346 ~ 21354926 (+)
G2306685 NA non-coding downstream 30286 21355058 ~ 21356436 (+)
G2306716 NA non-coding downstream 31941 21356713 ~ 21356926 (+)
G2306732 NA non-coding downstream 80057 21404829 ~ 21405300 (+)
G2306688 NA other upstream 416 21320623 ~ 21323896 (+)
G2306173 LOC106570399 other upstream 510014 20813189 ~ 20814298 (+)
G2305956 NA other upstream 770628 20553333 ~ 20553684 (+)
G2304678 NA other upstream 1494351 19828217 ~ 19829961 (+)
G2306825 NA other downstream 262316 21587088 ~ 21587434 (+)
c32h5orf49 cssa14h5orf49 other downstream 1081245 22405971 ~ 22416346 (+)
G2308224 NA other downstream 1279548 22604320 ~ 22604721 (+)
LOC110488133 NA other downstream 2654578 23979350 ~ 23981983 (+)
LOC110488142 LOC106570295 other downstream 2826915 24151527 ~ 24157473 (+)

Expression


Co-expression Network