G2306685


Basic Information

Item Value
gene id G2306685
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 21355058 ~ 21356436 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2638633
attttatgttattttaatggacaaaaatagctttctttcaaaaacaaggacattccttagtgacaccaaacttttgattggtagtgTACATGTTAGTGTTATCGCACTGGACATTGGTTACTACGGTGCAAAGGGGTCTATTTGTAAGCGTACAACTATAGATCTGGGACTATTGCTATATGTATTTCAACTTAGTTGATTTGATTGTTTTGGAGCCTAGCTAAAAACTAGGCCGTGTTCCTCAAAGATAACATTCCCCCATCTGGGAAGAAAACCACCTCGAAAAGTACTTGTGGTTGTAAACTATGGTACTGTACCTACTACTCTCATGCAGTTGTCAGTTTCAACTTGTAGCCAAATTCACTATAAAATGAGTTTACTGTTGGGCCAGTCAGTGCCCTGTGCTgcataaaaacatatatattgaaCTATACTAATGACAAAATGTGTGAATGTTTGCTGAAAGGTCTCTGTGTTACAAATACCTGGGtccaacattttttttacatattgtaTTAATTAATTTAATCTTTCAATTACACAattatgacgtgtgtgtgtgtgtgtgtaaaggtatTTCTCTCTCTGATATGGAAAGCTATCTGAAAGGTCAGTACAGTACTTACAGTATGTTTTTAGTAGTGAGTACCAACAACCCTTGTGGTATGTAGAGGTAATCATTCAGACTGCgtccctacatagtgcaatacttttgtaGTCTGACTACCCATCCTCATCACTCTGGCCACATCCACTAGCATTTCTTGTATGGAGTGATCGATAGAGCAGCAGAATTCAATTCAGGATGTCAGgcaactacttttgaccagagccctatgggtttccgtatgggccctggtctaaagtactgcactataaagggaatgctTGAGGTCTCCCTAGACCCCAACTGTGCAAGTtataataaattaataaattaCCAGCGTTTCAAATGGAGTAGTACAGGATGTTAGTCTTATTGGTTCTAGGGTGCTGTAGTGACTGACTCTTAGCATGCCTCCAAAgcggcacactattccctgtatagtataCTATTTGTTTTACCAGGGCccggttaaaagtagtgcactataaaggggatagggtgccattcgggatatAACCTTTATGATGAAAGTGTTTGTTACTCATTTGACAACCAATTGGTATGATTCTATGATTCCATTGTGAGATAATGTTTGCATTGGTCTTTGTTCTGCTTTTGGGTGCAAAGGGAGGTGAATCATATCGAATATGTTGTCAGATGCCATAAGgttataaatgtttgttttttattgaATGTAATTAAGCATTTAAAGCACTTGAATTAGAAGGGAAATTTGAGTGTCTCCCACTATTTTATCTGAAATTGTGTGAAG

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2638633 True 1379 lncRNA 0.38 1 21355058 21356436

Neighbor

gene id symbol gene type direction distance location
LOC110488075 LOC106570373 coding upstream 814 21349951 ~ 21354244 (+)
LOC110489444 LOC105012574 coding upstream 17914 21334316 ~ 21337707 (+)
LOC100499586 LOC100499586 coding upstream 26336 21326921 ~ 21328722 (+)
LOC110488073 NA coding upstream 34663 21312509 ~ 21320395 (+)
LOC110488072 LOC106570395 coding upstream 44863 21307432 ~ 21311878 (+)
LOC110488077 fhl3 coding downstream 1825 21358261 ~ 21388079 (+)
stpg1 stpg1 coding downstream 40884 21397320 ~ 21403121 (+)
map7d1b NA coding downstream 53577 21410013 ~ 21458853 (+)
thrap3b thrap3 coding downstream 105785 21462221 ~ 21500971 (+)
LOC110488083 LOC106570366 coding downstream 156853 21513289 ~ 21515234 (+)
G2306687 NA non-coding upstream 132 21354346 ~ 21354926 (+)
G2306706 NA non-coding upstream 30286 21324312 ~ 21324772 (+)
G2306692 LOC100194703 non-coding upstream 99855 21254840 ~ 21255203 (+)
LOC110488070 NA non-coding upstream 116569 21233278 ~ 21238489 (+)
G2306716 NA non-coding downstream 277 21356713 ~ 21356926 (+)
G2306732 NA non-coding downstream 48393 21404829 ~ 21405300 (+)
G2306790 NA non-coding downstream 169006 21525442 ~ 21525891 (+)
LOC110488088 LOC106570364 non-coding downstream 198999 21555375 ~ 21560635 (+)
G2306808 NA non-coding downstream 210192 21566628 ~ 21566950 (+)
G2306688 NA other upstream 31162 21320623 ~ 21323896 (+)
G2306173 LOC106570399 other upstream 540760 20813189 ~ 20814298 (+)
G2305956 NA other upstream 801374 20553333 ~ 20553684 (+)
G2304678 NA other upstream 1525097 19828217 ~ 19829961 (+)
G2306825 NA other downstream 230652 21587088 ~ 21587434 (+)
c32h5orf49 cssa14h5orf49 other downstream 1049581 22405971 ~ 22416346 (+)
G2308224 NA other downstream 1247884 22604320 ~ 22604721 (+)
LOC110488133 NA other downstream 2622914 23979350 ~ 23981983 (+)
LOC110488142 LOC106570295 other downstream 2795251 24151527 ~ 24157473 (+)

Expression


Co-expression Network