G2306811


Basic Information

Item Value
gene id G2306811
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 21571950 ~ 21572437 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2638791
AAGTAGCTAACtgcatagagaatagggtgccatttcagattttCCCTGATGGATTGACATAAGAATTTCTATGTTATGTGTAGAGGTAGAGACACTTACCCCCTGTGGTCTCATGGGAGGAACGTCATAGAGGTCCTGTTGGGTGTGCTGGCCAGGGCTGTAGGCGTAAGACTGTCCCACTTGTGTTGGGGTCACCACCTGTCCACACCAGGACACACACAAGAAACAACACTATAAGGACCTCTGTCTCGACAACTGTTTCATGACAGTTCCACAACAGTGATAGTCTTACAaattacacacagtacacacaattCACCTCATACGTCCTATGACTTGTTACTGCAGGCCCCGAGTCATTCTGACGAAacctatttatctctctctcgtgGCTCCCATAGTTGgtttgtattcattagtgcacaatGGAACGGCAAGCGAAAACCAGCGTTTCTTATTGGAAatgttcaggtagtccctccctggac

Function

NR:

description
PREDICTED: enhancer of filamentation 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2638791 True 488 lncRNA 0.46 1 21571950 21572437

Neighbor

gene id symbol gene type direction distance location
LOC110488088 LOC106570364 coding upstream 13685 21555375 ~ 21560635 (+)
LOC110488087 zc3h12a coding upstream 24067 21535605 ~ 21547883 (+)
LOC110489402 LOC106570389 coding upstream 41358 21527584 ~ 21530592 (+)
LOC110488083 LOC106570366 coding upstream 56716 21513289 ~ 21515234 (+)
thrap3b thrap3 coding upstream 70979 21462221 ~ 21500971 (+)
tmem170b LOC106570362 coding downstream 105232 21677669 ~ 21690701 (+)
hivep1 LOC106570361 coding downstream 170610 21743047 ~ 21829048 (+)
edn1 LOC106570392 coding downstream 263871 21836308 ~ 21839826 (+)
LOC110488094 LOC106570360 coding downstream 375947 21948384 ~ 21950989 (+)
LOC118946490 NA coding downstream 476717 22049096 ~ 22050469 (+)
G2306810 NA non-coding upstream 104 21571441 ~ 21571846 (+)
G2306808 NA non-coding upstream 5000 21566628 ~ 21566950 (+)
G2306790 NA non-coding upstream 46059 21525442 ~ 21525891 (+)
G2306732 NA non-coding upstream 166650 21404829 ~ 21405300 (+)
G2306815 NA non-coding downstream 3960 21576397 ~ 21576695 (+)
G2306817 NA non-coding downstream 5883 21578320 ~ 21578597 (+)
G2306821 NA non-coding downstream 10529 21582966 ~ 21583293 (+)
G2306822 NA non-coding downstream 11995 21584432 ~ 21584734 (+)
G2306823 NA non-coding downstream 13600 21586037 ~ 21586394 (+)
G2306688 NA other upstream 248054 21320623 ~ 21323896 (+)
LOC110488072 LOC106570395 other upstream 260072 21307432 ~ 21311878 (+)
G2306173 LOC106570399 other upstream 757652 20813189 ~ 20814298 (+)
G2305956 NA other upstream 1018266 20553333 ~ 20553684 (+)
G2304678 NA other upstream 1741989 19828217 ~ 19829961 (+)
G2306825 NA other downstream 14651 21587088 ~ 21587434 (+)
c32h5orf49 cssa14h5orf49 other downstream 833580 22405971 ~ 22416346 (+)
G2308224 NA other downstream 1031883 22604320 ~ 22604721 (+)
LOC110488133 NA other downstream 2406913 23979350 ~ 23981983 (+)
LOC110488142 LOC106570295 other downstream 2579250 24151527 ~ 24157473 (+)

Expression


Co-expression Network