G2306827 (LOC106570363)


Basic Information

Item Value
gene id G2306827
gene name LOC106570363
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 21588869 ~ 21589257 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2638807
GGGGTGTTGTCTGCAGCCAGTACGCTCCTCTGTGGAGGGACCTGGTAGACATCCTGCCCTGGAGGCACCTGGTAGATGCCCTGCTGACCCGGGCTCTGGGAGGGCGGCACCTGGTACAGCCCTTGGGACGACGACACGCCCACCTTCTGCTGGTAGGCTGAGCCCGTAGGTGACGATTGGGCGGCCGGGGACTGGGTGTCGAACATGGGACCAATCAGCAGCTTGAGGCGGTTGCCGGGGGCGATACCCTGGCGCCCATGCAGCGAGCAGAGCCACCATCCCTCAAGGCCGCCCGTGTTCTGCTCAATGATCGTTAGGATGTCTCCCTTCCGGAAGGCCAACTCCTCCGGGGACTCCGGGACGTTGTCGTACAACGCCTTGGCCATCAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2638807 True 389 lncRNA 0.65 1 21588869 21589257

Neighbor

gene id symbol gene type direction distance location
LOC110488088 LOC106570364 coding upstream 30604 21555375 ~ 21560635 (+)
LOC110488087 zc3h12a coding upstream 40986 21535605 ~ 21547883 (+)
LOC110489402 LOC106570389 coding upstream 58277 21527584 ~ 21530592 (+)
LOC110488083 LOC106570366 coding upstream 73635 21513289 ~ 21515234 (+)
thrap3b thrap3 coding upstream 87898 21462221 ~ 21500971 (+)
tmem170b LOC106570362 coding downstream 88412 21677669 ~ 21690701 (+)
hivep1 LOC106570361 coding downstream 153790 21743047 ~ 21829048 (+)
edn1 LOC106570392 coding downstream 247051 21836308 ~ 21839826 (+)
LOC110488094 LOC106570360 coding downstream 359127 21948384 ~ 21950989 (+)
LOC118946490 NA coding downstream 459897 22049096 ~ 22050469 (+)
G2306826 NA non-coding upstream 105 21588529 ~ 21588764 (+)
G2306824 NA non-coding upstream 1966 21586652 ~ 21586903 (+)
G2306823 NA non-coding upstream 2475 21586037 ~ 21586394 (+)
G2306822 NA non-coding upstream 4135 21584432 ~ 21584734 (+)
G2306821 NA non-coding upstream 5576 21582966 ~ 21583293 (+)
G2306830 NA non-coding downstream 6182 21595439 ~ 21596483 (+)
G2306840 NA non-coding downstream 21931 21611188 ~ 21611428 (+)
G2306843 NA non-coding downstream 25616 21614873 ~ 21615153 (+)
G2306850 NA non-coding downstream 36821 21626078 ~ 21626278 (+)
G2306886 NA non-coding downstream 77878 21667135 ~ 21667347 (+)
G2306825 NA other upstream 1435 21587088 ~ 21587434 (+)
G2306688 NA other upstream 264973 21320623 ~ 21323896 (+)
LOC110488072 LOC106570395 other upstream 276991 21307432 ~ 21311878 (+)
G2306173 LOC106570399 other upstream 774571 20813189 ~ 20814298 (+)
G2305956 NA other upstream 1035185 20553333 ~ 20553684 (+)
c32h5orf49 cssa14h5orf49 other downstream 816760 22405971 ~ 22416346 (+)
G2308224 NA other downstream 1015063 22604320 ~ 22604721 (+)
LOC110488133 NA other downstream 2390093 23979350 ~ 23981983 (+)
LOC110488142 LOC106570295 other downstream 2562430 24151527 ~ 24157473 (+)
G2311528 NA other downstream 4145937 25735194 ~ 25736847 (+)

Expression


Co-expression Network