G2307829


Basic Information

Item Value
gene id G2307829
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 22288971 ~ 22296379 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2639908
tgtgtgtgtaggtgtgtacttATGCATTTGTGTACCTGTACCTGCGGTGTCCCTTGTGGTGCTTGGCGGTGGCAGACTTAGGGATGTGTATGGGTTCCTTCAGAGCTCCTCTCAGGTGGATGGTTCGCTCCTGGATCACCTCCCTGACGTGTTTGATCCAATCCTGCTTGTTCTCAATGCTCGACGCCTGCCATTGGCCCAGGGAAGGGGTCAAAGGTCGTAAATTAATTCACCCAATCACCTCGCTCTCAGAACTCACATTTTAGTCTAAACAGTTTCATACACCCAAACGGTTATATTCCAATACCCACACGACTTCATTCTAAGTAGTAAGCTAGTGTGGACATTGAAACAGAGAAtaaggagagtaggagaggaaaggagacaaagagaggaggCCACAGTAGAGTATTGAGATGCAGCCGAGGGCTATATTATGTGATAGGCTAGTTAGTACAGTTTTACTCACCATTGATCCATGTTTGCATCCCTGACTTGGCTTTGGTTCAAATATAGAATAGAGCATTTCACTGGTTTGTGTTTAGTTCATTTATATTACATTTTCAATGATGACAGAATGGCTCGAGATGACTGACGGACCACAGTTAGAGCATTTTGGTGGTGGCTAGTTAGTTAATTAGGTGGTAAACAGTTATATTGATGGACAGAATAGGAACAGAGTCATTATATTATGTCAGAGACAACTGGTTAGGAGTAGGGCAACATGATTTTCCAACCACTGACACAAACAAGAGGCGTCAGTACTAAAACTATCTTTGGAGGTGGGCATTAAAAACATATAAGATGTTCAATTCggtaaggagacagagagagagacggaagataaagccccttgaattgaactgATAGAGGGTCAACACGTGAGGTGTCAAATCCTAAAACAAGAAGAGATCCATTTTTCTAGAAGAGAAAACTGTACATGCCTCTCATCCATACAGAGGATGTAAAAAGTAGCTAGAGGGTGTGGGAGTTGGAGGAATTGTGGGAGTTTAGGGGTTAAAGTTCATGTCAGTGGTGTTGGCGTAAGCATGTTAGCCCACGGTTGGTTGGCAAACAAACATTGAATATTCAGAGATACAAACATAAACAAAACAGCCCCAGCCACAGATGTACGGTACTAGACTGTGTGATAGAACAGTCattagagagataaagacagcaaggtaacagatgtactgtactagactgtgtgatagaacagtcattagagagataaagacagcaagGTAACAGATGTACGGTACTAGACTGTGTGATAGAACAGTCattagagagataaagacagcaaggtaacagatgtacggtactagactgtatgatagaacagtcattagagagataaagacagcaagGTAACAGATGTACGGTACTAGACTGTGTGATAGAACAGTCattagagagataaagacagcaagGTAACAGATGTACGGTACTAGACTGTGTGATAGAACAGTCATTAGAGAGATAAAGGCAGCAAGGTAACAGATGTACGGTACTAGACTGTATGATAGAACAGTCatcagagacaacacagagagataaagacagcaaggtaacagatgtactgtactagactgtatgatagaacagtcatcagagacaacacagagagataaagacagcaagGTAACATATGTACTAGACTAGACTCTATGATAGAACAGTCattagagacaacacagagagataaagacagcaaggtaacagatgtactgtactagactgtatgatagaacagtcatcagagacaacacagagagataaagagaccaAGgtaacagatgtactagactagac

Function

NR:

description
triple functional domain protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2639908 True 1818 lncRNA 0.42 5 22288971 22296379

Neighbor

gene id symbol gene type direction distance location
LOC110488101 NA coding upstream 66869 22191696 ~ 22222102 (+)
LOC110488102 LOC106570350 coding upstream 66869 22214554 ~ 22222102 (+)
LOC110488103 LOC106570351 coding upstream 78502 22206924 ~ 22210469 (+)
LOC110488098 LOC106570353 coding upstream 127280 22133277 ~ 22161691 (+)
LOC110488097 LOC106570356 coding upstream 158930 22112030 ~ 22130041 (+)
c32h5orf49 cssa14h5orf49 coding downstream 109592 22405971 ~ 22416346 (+)
LOC118936411 NA coding downstream 256107 22552486 ~ 22565890 (+)
LOC118946522 NA coding downstream 270322 22566701 ~ 22572442 (+)
LOC110488106 NA coding downstream 276870 22573249 ~ 22579988 (+)
LOC110488108 LOC106588698 coding downstream 333803 22630182 ~ 22646620 (+)
G2307812 LOC106570344 non-coding upstream 16847 22270114 ~ 22272124 (+)
G2307779 LOC106570344 non-coding upstream 29007 22257136 ~ 22259964 (+)
G2307792 NA non-coding upstream 58820 22226286 ~ 22230151 (+)
G2307767 NA non-coding upstream 113565 22174993 ~ 22175406 (+)
LOC118946490 NA non-coding upstream 238502 22049096 ~ 22050469 (+)
G2307876 NA non-coding downstream 72800 22369179 ~ 22428002 (+)
G2307880 NA non-coding downstream 79317 22375696 ~ 22376547 (+)
G2307904 NA non-coding downstream 114107 22410486 ~ 22410998 (+)
G2308165 NA non-coding downstream 232213 22528592 ~ 22528802 (+)
G2308170 NA non-coding downstream 235754 22532133 ~ 22532363 (+)
G2306825 NA other upstream 701537 21587088 ~ 21587434 (+)
G2306688 NA other upstream 965075 21320623 ~ 21323896 (+)
LOC110488072 LOC106570395 other upstream 977093 21307432 ~ 21311878 (+)
G2306173 LOC106570399 other upstream 1474673 20813189 ~ 20814298 (+)
G2305956 NA other upstream 1735287 20553333 ~ 20553684 (+)
G2308224 NA other downstream 307941 22604320 ~ 22604721 (+)
LOC110488133 NA other downstream 1682971 23979350 ~ 23981983 (+)
LOC110488142 LOC106570295 other downstream 1855308 24151527 ~ 24157473 (+)
G2311528 NA other downstream 3438815 25735194 ~ 25736847 (+)

Expression


Co-expression Network