G2308170


Basic Information

Item Value
gene id G2308170
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 22532133 ~ 22532363 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2640301
caattgttaatctgtaaaagtttgtgagggtcttaggggccaagccaaatttcttcagcctcctgaggttgaagagacgcttcttgtgccttcttcaccacactgtctgtgtgggtggaccatttcagatcatcggtgatgtgtacgccgagaaacGTGAAGCTTTTCACcatctccactgcggtcccgtcaatgtggatagcaTTTAATGGCTACAggtgtgagtgctac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2640301 True 231 lncRNA 0.48 1 22532133 22532363

Neighbor

gene id symbol gene type direction distance location
c32h5orf49 cssa14h5orf49 coding upstream 115787 22405971 ~ 22416346 (+)
LOC110488101 NA coding upstream 310031 22191696 ~ 22222102 (+)
LOC110488102 LOC106570350 coding upstream 310031 22214554 ~ 22222102 (+)
LOC110488103 LOC106570351 coding upstream 321664 22206924 ~ 22210469 (+)
LOC110488098 LOC106570353 coding upstream 370442 22133277 ~ 22161691 (+)
LOC118936411 NA coding downstream 20123 22552486 ~ 22565890 (+)
LOC118946522 NA coding downstream 34338 22566701 ~ 22572442 (+)
LOC110488106 NA coding downstream 40886 22573249 ~ 22579988 (+)
LOC110488108 LOC106588698 coding downstream 97819 22630182 ~ 22646620 (+)
LOC110488110 LOC106570331 coding downstream 333425 22865788 ~ 22871890 (+)
G2308165 NA non-coding upstream 3331 22528592 ~ 22528802 (+)
G2307876 NA non-coding upstream 104131 22369179 ~ 22428002 (+)
G2307904 NA non-coding upstream 121135 22410486 ~ 22410998 (+)
G2307880 NA non-coding upstream 155586 22375696 ~ 22376547 (+)
G2307829 NA non-coding upstream 235754 22288971 ~ 22296379 (+)
G2308171 NA non-coding downstream 23 22532386 ~ 22532622 (+)
G2308203 NA non-coding downstream 24328 22556691 ~ 22558285 (+)
G2308206 NA non-coding downstream 27303 22559666 ~ 22566449 (+)
G2308207 NA non-coding downstream 30631 22562994 ~ 22569829 (+)
G2306825 NA other upstream 944699 21587088 ~ 21587434 (+)
G2306688 NA other upstream 1208237 21320623 ~ 21323896 (+)
LOC110488072 LOC106570395 other upstream 1220255 21307432 ~ 21311878 (+)
G2306173 LOC106570399 other upstream 1717835 20813189 ~ 20814298 (+)
G2308224 NA other downstream 71957 22604320 ~ 22604721 (+)
LOC110488133 NA other downstream 1446987 23979350 ~ 23981983 (+)
LOC110488142 LOC106570295 other downstream 1619324 24151527 ~ 24157473 (+)
G2311528 NA other downstream 3202831 25735194 ~ 25736847 (+)
G2311978 NA other downstream 3386789 25919152 ~ 25919800 (+)

Expression


Co-expression Network