G2308203


Basic Information

Item Value
gene id G2308203
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 22556691 ~ 22558285 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2640335
gtcaattagaaaggccttctcgcagaagtgtttcagggagcgtttgacagtgatgagaggtggttgtttggtcgcagacccattacggatgcaggcaatgaggcagtgatcgctgagatcttgattgaaaacagcagaggtgtatttggagggcgaattagttaggatgacatctatgagggtgcccgtgtttactgatttggggttgtaccaggtaggttcattgatcatttgtgtgagattgagggcatcaagcttagtttgtaggatggccgggctGTTaggcatgtcccagtttaggtcacctagtagcacgagctcagaagatagatggggggcaatcagttcacatatagtatcgagggcacagctgggggcagagggaggtctatagcaagaggcaacagtgagagacttgtttctggaaaggtgcatttttagaagtagaagctcaaattatttgggtacagacttagcctgcagagttctgtattactttctatctttgcagtagattgcaacaccaccccctttggcagttctatcttggcagaaaacattatagttagcaatggagatttcagggtttttggtggttttcctaagccaggattcagacacggctaagacatctgggttggcagagtgtgctaaagctgtgagtaaaacaaacttagggagtaggcttctaatgttaacatgcatgaaaccaaggcttttacgtttacagaagtcaacaaatgatagcacCTGGcgggtgggagtggagctaggcactgcaggacctgaattaacctccacatcaccagaggaacagaggagaagtagaataagggtatggctaaagactgtacgaactggccgtctagcactttcagaacagagagtaaaaggagcaggtgtcggcacgatagcatagattcaaggcatagtgtacagacaaaggtaaggtaggatgtgagtacattggaggtaaacctaggcattgagtaatgaagagagcaatgtagtctctagagatgtttaaaccaggtgatgtcatggcatatgtaggaggtggaacaacatggttggttaagccatattgagcagggctagaggctctacagtgaaataagacagtaatcactaaccaggacagtaatggacaaggcatattgatattagagaggcatgcgtagccaagtcaacatatgggtccagtgagtggttggcctggctggggacacggcgattcagacagttagcaggctaacaagctaacagttagaaGCTAAAGaagctagcagctagtagaccagggCAAGCTAACAGTTAGCAGGCCAGGTTAGtaagcaagcagttagcatgggctagcagttagtagaccagggcaagctagcagtta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2640335 True 1387 lncRNA 0.46 2 22556691 22558285

Neighbor

gene id symbol gene type direction distance location
c32h5orf49 cssa14h5orf49 coding upstream 140345 22405971 ~ 22416346 (+)
LOC110488101 NA coding upstream 334589 22191696 ~ 22222102 (+)
LOC110488102 LOC106570350 coding upstream 334589 22214554 ~ 22222102 (+)
LOC110488103 LOC106570351 coding upstream 346222 22206924 ~ 22210469 (+)
LOC110488098 LOC106570353 coding upstream 395000 22133277 ~ 22161691 (+)
LOC118946522 NA coding downstream 8416 22566701 ~ 22572442 (+)
LOC110488106 NA coding downstream 14964 22573249 ~ 22579988 (+)
LOC110488108 LOC106588698 coding downstream 71897 22630182 ~ 22646620 (+)
LOC110488110 LOC106570331 coding downstream 307503 22865788 ~ 22871890 (+)
mrpl36 LOC106570330 coding downstream 327858 22886143 ~ 22889735 (+)
LOC118936411 NA non-coding upstream 2784 22552486 ~ 22565890 (+)
G2308171 NA non-coding upstream 24069 22532386 ~ 22532622 (+)
G2308170 NA non-coding upstream 24328 22532133 ~ 22532363 (+)
G2308165 NA non-coding upstream 27889 22528592 ~ 22528802 (+)
G2307904 NA non-coding upstream 145693 22410486 ~ 22410998 (+)
G2308206 NA non-coding downstream 1381 22559666 ~ 22566449 (+)
G2308207 NA non-coding downstream 4709 22562994 ~ 22569829 (+)
G2308208 NA non-coding downstream 8342 22566627 ~ 22573747 (+)
G2308211 NA non-coding downstream 22584 22580869 ~ 22581116 (+)
G2306825 NA other upstream 969257 21587088 ~ 21587434 (+)
G2306688 NA other upstream 1232795 21320623 ~ 21323896 (+)
LOC110488072 LOC106570395 other upstream 1244813 21307432 ~ 21311878 (+)
G2306173 LOC106570399 other upstream 1742393 20813189 ~ 20814298 (+)
G2308224 NA other downstream 46035 22604320 ~ 22604721 (+)
LOC110488133 NA other downstream 1421065 23979350 ~ 23981983 (+)
LOC110488142 LOC106570295 other downstream 1593402 24151527 ~ 24157473 (+)
G2311528 NA other downstream 3176909 25735194 ~ 25736847 (+)
G2311978 NA other downstream 3360867 25919152 ~ 25919800 (+)

Expression


Co-expression Network