G2308563


Basic Information

Item Value
gene id G2308563
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 23044595 ~ 23045366 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2640733
AAGAATACAACACAGAAACAATACTAAACAAATGAATACATAGAAAAACACTTTATTAATAAAAATATTAAAGCATTGCCAAGTTACACAAAGTTGAGTTTTCATAAAACGAGGATGACAATCTACTGCAGATTGAGGTCTTGACTTCCTCTCTAAACATGAACAATGTTGGTAAAGGGAGTTCACTGACTGACCTCTAATGAATCCAattcttaaaaaaaaagaaaaaagcttAAATATCACAGATGGGTGGTCTTGATAGATGACATCTAGTCTCCTATCCTCCTGAAGTTGAGTCGGAGGTCCCGTGGTTTTTCACTGAGGGTTGCACTGTGATTGAGGAGTCTAGGACCCCTGGTCGATTAGGCAATATGGATGGGCGTGTTCCAGGTCGTTTTTTATTGCAGTCACACTGCACACATTATCTCATACTTCTTACAATGCCTGGATAAGTATTTATCTTGAATGTAACAGGAACCACATTAATATGATAGTCTAGCAAATCTTCTAAAAATACGAGATGGGGACTACAGGCTGATTGACATATACAGGCCACAGGATGCAGCAGACTTCAGAGTTAGACTCCTTGTTGGGTTGGTCtgctagtcctcctctccctcagacTC
>TU2640734
AAGAATACAACACAGAAACAATACTAAACAAATGAATACATAGAAAAACACTTTATTAATAAAAATATTAAAGCATTGCCAAGTTACACAAAGTTGAGTTTTCATAAAACGAGGATGACAATCTACTGCAGATTGAGGTCTTGACTTCCTCTCTAAACATGAACAATGTTGGTAAAGGGAGTTCACTGACTGACCTCTAATGAATCCAattcttaaaaaaaaagaaaaaagcttAAATATCACAGATGGGTGGTCTTGATAGATGACATCTAGTCTCCTATCCTCCTGAAGTTGAGTCGGAGGTCCCGTGGTTTTTCACTGAGGGTTGCACTGTGATTGAGGAGTCTAGGACCCCTGGTCGGTTAGGCAATATGGATGGGCGTGTTCCAGGTCGTTTTTTATTGCAGTCACACTGCACACATTATCTCATACTTCTTACAATGCCTGGATAAGTATTTATCTTGAATGTAACAGGAACCACATTAATATGATAGTCTAGCAAATCTTCTAAAAATACGAGATGGGGACTACAGGCTGATTGACATATACAGGCCACAGGATGCAGCAGACTTCAGAGTTAGACTCCTTGTTGGGTTGGTCtgctagtcctcctctccctcagacTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2640733 False 626 lncRNA 0.39 2 23044595 23045366
TU2640734 True 626 lncRNA 0.39 2 23044595 23045366

Neighbor

gene id symbol gene type direction distance location
LOC110488122 LOC100136469 coding upstream 27579 23012552 ~ 23017016 (+)
LOC110488120 LOC106570322 coding upstream 38697 22991479 ~ 23005898 (+)
LOC110488118 NA coding upstream 57524 22985009 ~ 22987071 (+)
LOC110488117 abcf1 coding upstream 69710 22956174 ~ 22974885 (+)
LOC110488113 LOC106570326 coding upstream 96488 22929891 ~ 22948107 (+)
LOC110489407 LOC106588710 coding downstream 16731 23062097 ~ 23069768 (+)
LOC110488124 LOC106570319 coding downstream 27151 23072517 ~ 23076040 (+)
LOC110488125 LOC106570318 coding downstream 62616 23107982 ~ 23120043 (+)
LOC118946519 NA coding downstream 153641 23199004 ~ 23214618 (+)
LOC110489408 LOC106588717 coding downstream 255204 23300570 ~ 23469848 (+)
G2308550 NA non-coding upstream 15006 23029046 ~ 23029589 (+)
G2308517 NA non-coding upstream 131569 22911533 ~ 22913026 (+)
G2308467 NA non-coding upstream 192264 22851746 ~ 22852331 (+)
G2308413 NA non-coding upstream 281889 22762394 ~ 22762706 (+)
G2308564 NA non-coding downstream 859 23046225 ~ 23047474 (+)
G2308565 LOC106570320 non-coding downstream 3180 23048546 ~ 23051189 (+)
G2308568 NA non-coding downstream 20887 23066253 ~ 23066662 (+)
G2308224 NA other upstream 439874 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 628303 22405971 ~ 22416346 (+)
G2306825 NA other upstream 1457161 21587088 ~ 21587434 (+)
G2306688 NA other upstream 1720699 21320623 ~ 21323896 (+)
LOC110488072 LOC106570395 other upstream 1732717 21307432 ~ 21311878 (+)
LOC110488133 NA other downstream 933984 23979350 ~ 23981983 (+)
LOC110488142 LOC106570295 other downstream 1106321 24151527 ~ 24157473 (+)
G2311528 NA other downstream 2689828 25735194 ~ 25736847 (+)
G2311978 NA other downstream 2873786 25919152 ~ 25919800 (+)
G2312300 NA other downstream 3279786 26325152 ~ 26325383 (+)

Expression


Co-expression Network