G2308564


Basic Information

Item Value
gene id G2308564
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 23046225 ~ 23047474 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2640735
gaaaatgggtgggctatttaccaatagactatgtacagctgcagcgatcggttagctgctcagatagctgatgtttgaagttggtgagggagataagagtctccaacttcagcgatttttgcaattcgttccagtcacaggcagcagagtactggaacgaaaggcggccaaatgaggtgttggctttagggatgatcagtgagatacacctgctggagcgcgtgctacggatgggtgttgccatcgtgacaagtgagctgagataaggcggagctttacctagcatggacttgtagatgacctggagccagtgggtctggcaacgaatatgtagcgagggccagccgactagagcatacaagtcgcagtggtgggtggtataaggtgctttagtgacaaaacggatggcactgtgatagactgcatccagtttgctgagtagagtgttggaagccattttgtagatgacatcgccgaagtcgaggatcggtaggatagtcagttttactagggtaagcttggcggcgtgagtgaaggaggctttgttttaCATAGAAACTGTGAAACATTGTCCTGTATAAAATGATAACACTGACCTTTGTAGAAGAGCACCACTATCTTGGAGAAGGACTTCATGAAGTGGATATTGTCATAGCAGTACTCCTGGATCCTCAGTAGCAGCACCAGCTCTGACTGGCCCTGGGTGCTGAACGCTGCTAGCAGGGGGGCATAGTGCTGGAGGGGAGAGGATACACACCCCATCAACTGTCATTATATTCATGGTTGATGTTAGCGTTGTGCAGTACTTCAAGGTGTTTGAGAGCCTCCACAGTGACCAGCTCTCATGTTATAGAGTGGTTGGGTTAGGAGTGAGATAAGTTATTAATGGTTGATGTTATGATGTACTTTAAGGTGTTTGAGGGCCTCCACAGTGACCAGCTCTCATGTTATAGAGTGGTTGGGTTAGGAGTGAGATAAGTTATTAATGGTTGATGTTATGATGTACTTTAAGGTGTTTGAGGGCTTGCTCGGTGACCAACTCCTCCTTCTTGTTCCACTCCACAGCATTCATGAGAATGTtccacagcagaccaatcacaGCCTGCTCCTGGAGAGCactcctcttcatctcctccttcACGTACACCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2640735 True 1150 lncRNA 0.48 2 23046225 23047474

Neighbor

gene id symbol gene type direction distance location
LOC110488122 LOC100136469 coding upstream 29209 23012552 ~ 23017016 (+)
LOC110488120 LOC106570322 coding upstream 40327 22991479 ~ 23005898 (+)
LOC110488118 NA coding upstream 59154 22985009 ~ 22987071 (+)
LOC110488117 abcf1 coding upstream 71340 22956174 ~ 22974885 (+)
LOC110488113 LOC106570326 coding upstream 98118 22929891 ~ 22948107 (+)
LOC110489407 LOC106588710 coding downstream 14623 23062097 ~ 23069768 (+)
LOC110488124 LOC106570319 coding downstream 25043 23072517 ~ 23076040 (+)
LOC110488125 LOC106570318 coding downstream 60508 23107982 ~ 23120043 (+)
LOC118946519 NA coding downstream 151533 23199004 ~ 23214618 (+)
LOC110489408 LOC106588717 coding downstream 253096 23300570 ~ 23469848 (+)
G2308563 NA non-coding upstream 859 23044595 ~ 23045366 (+)
G2308550 NA non-coding upstream 16636 23029046 ~ 23029589 (+)
G2308517 NA non-coding upstream 133199 22911533 ~ 22913026 (+)
G2308467 NA non-coding upstream 193894 22851746 ~ 22852331 (+)
G2308565 LOC106570320 non-coding downstream 1072 23048546 ~ 23051189 (+)
G2308568 NA non-coding downstream 18779 23066253 ~ 23066662 (+)
G2308574 NA non-coding downstream 35465 23082939 ~ 23083251 (+)
G2308224 NA other upstream 441504 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 629933 22405971 ~ 22416346 (+)
G2306825 NA other upstream 1458791 21587088 ~ 21587434 (+)
G2306688 NA other upstream 1722329 21320623 ~ 21323896 (+)
LOC110488072 LOC106570395 other upstream 1734347 21307432 ~ 21311878 (+)
LOC110488133 NA other downstream 931876 23979350 ~ 23981983 (+)
LOC110488142 LOC106570295 other downstream 1104213 24151527 ~ 24157473 (+)
G2311528 NA other downstream 2687720 25735194 ~ 25736847 (+)
G2311978 NA other downstream 2871678 25919152 ~ 25919800 (+)
G2312300 NA other downstream 3277678 26325152 ~ 26325383 (+)

Expression


Co-expression Network