G2308565 (LOC106570320)


Basic Information

Item Value
gene id G2308565
gene name LOC106570320
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 23048546 ~ 23051189 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2640736
GCGACTTCATACGAGCGTGTTTCCTGTGAATACTTTACCTTTTTGATTTCCTCCTCGAAGGCATTCTGCAGGTACTTGTACCTCCTGATAAGCTTGTTAAaaaccTGAGCATAGTGGCGGAGGTTGGCATGGTTCTCCTTGGTGGTAAACACACAGTGTTCTGTCACCTTGGTCTTGTCCCCCTCGTCAATGCGTGTCCCACCGGGAGCGAGCATGCTCCCCGCGATGAGGATGTCGAAGAGAGTGTCGGCATAGCGACGGTAGTCGAGTCGGGACCCGGTAACGTCCAGGAACTTGGCTACAGCATCGAGGTCCCCTCCTGCTTCGTTGAGGCCCAGAATAATTGTGTCTCTAAAAACTGTGGGCTCAAACTTCTCCTTTTCA

Function

NR:

description
basic leucine zipper and W2 domain-containing protein 2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2640736 True 384 lncRNA 0.52 3 23048546 23051189

Neighbor

gene id symbol gene type direction distance location
LOC110488122 LOC100136469 coding upstream 31530 23012552 ~ 23017016 (+)
LOC110488120 LOC106570322 coding upstream 42648 22991479 ~ 23005898 (+)
LOC110488118 NA coding upstream 61475 22985009 ~ 22987071 (+)
LOC110488117 abcf1 coding upstream 73661 22956174 ~ 22974885 (+)
LOC110488113 LOC106570326 coding upstream 100439 22929891 ~ 22948107 (+)
LOC110489407 LOC106588710 coding downstream 10908 23062097 ~ 23069768 (+)
LOC110488124 LOC106570319 coding downstream 21328 23072517 ~ 23076040 (+)
LOC110488125 LOC106570318 coding downstream 56793 23107982 ~ 23120043 (+)
LOC118946519 NA coding downstream 147818 23199004 ~ 23214618 (+)
LOC110489408 LOC106588717 coding downstream 249381 23300570 ~ 23469848 (+)
G2308564 NA non-coding upstream 1072 23046225 ~ 23047474 (+)
G2308563 NA non-coding upstream 3180 23044595 ~ 23045366 (+)
G2308550 NA non-coding upstream 18957 23029046 ~ 23029589 (+)
G2308517 NA non-coding upstream 135520 22911533 ~ 22913026 (+)
G2308568 NA non-coding downstream 15064 23066253 ~ 23066662 (+)
G2308574 NA non-coding downstream 31750 23082939 ~ 23083251 (+)
G2308592 NA non-coding downstream 53508 23104697 ~ 23104902 (+)
G2308224 NA other upstream 443825 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 632254 22405971 ~ 22416346 (+)
G2306825 NA other upstream 1461112 21587088 ~ 21587434 (+)
G2306688 NA other upstream 1724650 21320623 ~ 21323896 (+)
LOC110488072 LOC106570395 other upstream 1736668 21307432 ~ 21311878 (+)
LOC110488133 NA other downstream 928161 23979350 ~ 23981983 (+)
LOC110488142 LOC106570295 other downstream 1100498 24151527 ~ 24157473 (+)
G2311528 NA other downstream 2684005 25735194 ~ 25736847 (+)
G2311978 NA other downstream 2867963 25919152 ~ 25919800 (+)
G2312300 NA other downstream 3273963 26325152 ~ 26325383 (+)

Expression


Co-expression Network