G2308882 (LOC106570315)


Basic Information

Item Value
gene id G2308882
gene name LOC106570315
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 23235947 ~ 23236457 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2641106
GCTCTCCACTCTAAAGATCTGAGTGTCCCCTGTGCCGTCGTCCACCATGTTATGCTGGGCTGCCATGCTTTGGGACTCATGGAGCTTGGAGGCATCGAACTCCACCTGATGTATCTTAGCAATCCTCTCGGTCACAAATACTTTCCCGAACCCCTCGCTCTGGTTCTTATCCCTCCACCCCTGGAAGAACTGTTTGAAGATAGGAGTCTCCCCACCCTCTGGAAGTACCTGGATC

Function

NR:

description
PREDICTED: adseverin-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2641106 True 235 lncRNA 0.53 2 23235947 23236457

Neighbor

gene id symbol gene type direction distance location
LOC118946519 NA coding upstream 21329 23199004 ~ 23214618 (+)
LOC110488125 LOC106570318 coding upstream 115904 23107982 ~ 23120043 (+)
LOC110488124 LOC106570319 coding upstream 159907 23072517 ~ 23076040 (+)
LOC110489407 LOC106588710 coding upstream 166202 23062097 ~ 23069768 (+)
LOC110488122 LOC100136469 coding upstream 218931 23012552 ~ 23017016 (+)
LOC110489408 LOC106588717 coding downstream 64113 23300570 ~ 23469848 (+)
LOC110488130 LOC106570312 coding downstream 239317 23475774 ~ 23540812 (+)
LOC110488131 LOC106570311 coding downstream 521836 23758293 ~ 23883531 (+)
LOC118946518 NA coding downstream 578139 23814596 ~ 23818032 (+)
LOC110488133 NA coding downstream 742909 23979350 ~ 23981983 (+)
G2308873 arl4a non-coding upstream 11117 23222533 ~ 23224830 (+)
G2308592 NA non-coding upstream 131045 23104697 ~ 23104902 (+)
G2308574 NA non-coding upstream 152696 23082939 ~ 23083251 (+)
G2308936 NA non-coding downstream 101039 23337496 ~ 23337695 (+)
G2308991 NA non-coding downstream 209694 23446151 ~ 23450031 (+)
G2309092 NA non-coding downstream 418455 23654912 ~ 23658368 (+)
G2309185 NA non-coding downstream 606314 23842771 ~ 23843517 (+)
G2308224 NA other upstream 631226 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 819655 22405971 ~ 22416346 (+)
G2306825 NA other upstream 1648513 21587088 ~ 21587434 (+)
G2306688 NA other upstream 1912051 21320623 ~ 21323896 (+)
LOC110488072 LOC106570395 other upstream 1924069 21307432 ~ 21311878 (+)
LOC110488142 LOC106570295 other downstream 915230 24151527 ~ 24157473 (+)
G2311528 NA other downstream 2498737 25735194 ~ 25736847 (+)
G2311978 NA other downstream 2682695 25919152 ~ 25919800 (+)
G2312300 NA other downstream 3088695 26325152 ~ 26325383 (+)

Expression


Co-expression Network