G2308991


Basic Information

Item Value
gene id G2308991
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 23446151 ~ 23450031 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2641229
ataatatgttcaccccatacccaatataacaataatatgttcaccccatacccaatataacaataatatgttcaccccatacccaatataacaataatatattcaccccatacccaatataacaataatatgttcaccccatacccaatataacaataatatgttcaccccatacccaatataacaataatatgttcaccccatacccaatataacaataatatgttcaccccatacccaatataacataatatattcaccccatacccaatataacaataatatattcaccccatacccaatataacaataatatattcaccccatacccaatataacaataatatattcacccaatataacaataatatgttcaccccatacccaatataacaatactatgttcaccccatacccaatataacaataatatattcacc
>TU2641231
ataatatgttcaccccatacccaatataacaataatatgttcaccccatacccaatataacaataatatgttcaccccatacccaatataacaataatatattcaccccatacccaatataacaataatatgttcaccccatacccaatataacaataatatgttcaccccatacccaatataacaataatatgttcaccccatacccaatataacaataatatgttcaccccatacccaatataacataatatattcaccccatacccaatataacaataatatattcaccccatacccaatataacaatactatgttcaccccatacccaatataacaataatatgttcaccccatacccaatataacaataatatgttcaccccatacccaatataacaataatatgttcaccccatacccaatataacaataatatattcaccccatacccaatataacaataatatattcaccccatacccaatataacaataatatattcaccccatacccaatataacaatactatgttcaccccatacccaatataacaataatatgttcaccccatacccaatataacaataatatgttcaccccatacccaatataacaatactatgttcaccccatacccaatataacaataatatgttcaccccatacccaatataacaatactatgttcaccccatacccaatataacaataatatattcaccccatacccaatataacaataatatgttcaccccatacccaatataacaatactatgttcaccccatacccaatataacaataatatgttcaccccatacccaatataacaatactatgttcaccccatacccaatataacaataatatgtt

Function

NR:

description
PREDICTED: uncharacterized protein LOC106591364 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2641229 False 440 lncRNA 0.31 2 23446151 23450031
TU2641231 True 877 lncRNA 0.32 2 23446151 23448350

Neighbor

gene id symbol gene type direction distance location
LOC118946519 NA coding upstream 231533 23199004 ~ 23214618 (+)
LOC110488125 LOC106570318 coding upstream 326108 23107982 ~ 23120043 (+)
LOC110488124 LOC106570319 coding upstream 370111 23072517 ~ 23076040 (+)
LOC110489407 LOC106588710 coding upstream 376406 23062097 ~ 23069768 (+)
LOC110488122 LOC100136469 coding upstream 429135 23012552 ~ 23017016 (+)
LOC110488130 LOC106570312 coding downstream 25743 23475774 ~ 23540812 (+)
LOC110488131 LOC106570311 coding downstream 308262 23758293 ~ 23883531 (+)
LOC118946518 NA coding downstream 364565 23814596 ~ 23818032 (+)
LOC110488133 NA coding downstream 529335 23979350 ~ 23981983 (+)
LOC110488137 LOC106606710 coding downstream 594409 24044440 ~ 24059317 (+)
G2308936 NA non-coding upstream 108456 23337496 ~ 23337695 (+)
G2308882 LOC106570315 non-coding upstream 209694 23235947 ~ 23236457 (+)
G2308873 arl4a non-coding upstream 221321 23222533 ~ 23224830 (+)
G2308592 NA non-coding upstream 341249 23104697 ~ 23104902 (+)
LOC110489408 LOC106588717 non-coding downstream 13804 23300570 ~ 23469848 (+)
G2309092 NA non-coding downstream 204881 23654912 ~ 23658368 (+)
G2309185 NA non-coding downstream 392740 23842771 ~ 23843517 (+)
G2309190 NA non-coding downstream 399825 23849856 ~ 23860777 (+)
G2309216 NA non-coding downstream 448756 23898787 ~ 23925335 (+)
G2308224 NA other upstream 841430 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 1029859 22405971 ~ 22416346 (+)
G2306825 NA other upstream 1858717 21587088 ~ 21587434 (+)
G2306688 NA other upstream 2122255 21320623 ~ 21323896 (+)
LOC110488072 LOC106570395 other upstream 2134273 21307432 ~ 21311878 (+)
LOC110488142 LOC106570295 other downstream 701656 24151527 ~ 24157473 (+)
G2311528 NA other downstream 2285163 25735194 ~ 25736847 (+)
G2311978 NA other downstream 2469121 25919152 ~ 25919800 (+)
G2312300 NA other downstream 2875121 26325152 ~ 26325383 (+)

Expression


Co-expression Network