G2309092


Basic Information

Item Value
gene id G2309092
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 23654912 ~ 23658368 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2641347
ccaaacacatagaaaaccaaaactagaacaacacatagaatgcccaccccaacgaGATGATTAACTTAAACAAgaaacataacaaaggaactaaggtcaggacgtgacatacaGACATGAGTGCATAAATGTTTTATGTATGTGTGGTCTCCGGAATATATCCCACTATCCAGGCgttacaagcgccatgctctactaactgagctacagaggaccatgctctactaactgagctacagaggaccatgttctactaactgagctacagaggaccatgctctactaactgagctacagaggaccatgctctactaactgagttacagaggaccatgttctactaactgagctacagaggaccatgttctactaactgagttacagaggaccatgtcctactaagtGATCTACCGAGGAccacgttctactaactgaactacagaggaccatgctctactcaCTGATTcatagaggaccatgttctactaactgagatacagaggaccatgttctactaactgagttacggaggaccatgctctactaactgagttacagaggaccatgttctactaactgagctacagaggaccatgttctactaactgagctacagaggaccatgttctactaactgagctacagaggaccatgttctactaactgagttacagaggaccatgttctactaactgatctacagaggaccatgttctactaactgagttgcagagtaccatgttctactaactgtgttacagaggaccatgttctaataactgagctacagaggaccatgttctactaactgagttacagaggaccatgctctactaactgagttacagaggaccatgttctactaactgagttacagaggaccatgttctactaactgagctacagaggaccatgttctactaactgagctacagaggaccatgctctacaaATTGAGtaacagaggaccatgttctactaactgagttacggaggaccatgttctactaactgatctacagaggaccatgttctactaactgagctacagaggaccatgctctactaaccgagttacagaggaccatgttctactaactgagctacagaggaccatgttctactaactgagctacaggggaccatgctctactgaccgagttacagaggaccatgttctactaactgagtgacagaggaccatgttctactaactgagctacagaggtcCATGTTTTACTAAATtatctacagaggaccatgctctactaattgagttacagaggaccatgctctacaaATTGAGTAAGATAGATAGATGAGGGATACATGGAGGGATAGATGAGGGatacatggagggagagatgagggatacatggagggagagatgaggggtagaTGAGGGATACATGGAGGGATAGATGAGGGATAGATGAGGGatacatggagggagagatgaggggtagaTGAGGGATGCATGGAGGGATAGATGAGGGATAGATGAGGGatacatggagggagagatgaggggtagaTTAGGGATAGATGAGGGatacatggagggagagatgaggggtagaTGAGGGATACATGGAGGGATAGATGAGGGATAGATGAGGGATACATGGAGGGATAGATGAGGGATACATGGAGGGATAGATGAGGAATACATGCAGGGATAGATGAGGGATACATGGAGGGATAGATGAGGGatacatggagggagagatgagggatacATGGAGGGATAGATGAGGGATAGATGAGGGATACATGGAGGGATAGATGAGGAATACATGGAGGGATAGATTAGGGATACATGGAGGGATAGATGAGGGatacatggagggagagatgagggatacATGGAGGGATAGATGAGGGATAGATGAGGGatacatggagggagagatgaggggtagaTGAGGGatacatggagggagagatgaggggtagaTGAGGGATACATGGAGGGATAGATGAAGGATAGACAGGTCTTTCATTGGTATCACTCCTACTCCCGCTCTTCTCCCCcagcgctcgagggcgccaggctgccctgcattacTCACTCCTGCTACCATCATTACGCattcctgccaccatcattacgctcaCCTGCCTTCCCTTGTAACGCACATCAGcgattcattggactcacctggacttaaTCACCTGTTTTATTACCTCCcttatatctgtctgttccccagctccaTTCCCCACCTCAGCATTGATTGTAGT

Function

NR:

description
hypothetical protein EH28_24508, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2641347 True 2244 lncRNA 0.46 8 23654912 23658368

Neighbor

gene id symbol gene type direction distance location
LOC110488130 LOC106570312 coding upstream 114100 23475774 ~ 23540812 (+)
LOC110489408 LOC106588717 coding upstream 185064 23300570 ~ 23469848 (+)
LOC118946519 NA coding upstream 440294 23199004 ~ 23214618 (+)
LOC110488125 LOC106570318 coding upstream 534869 23107982 ~ 23120043 (+)
LOC110488124 LOC106570319 coding upstream 578872 23072517 ~ 23076040 (+)
LOC110488131 LOC106570311 coding downstream 99925 23758293 ~ 23883531 (+)
LOC118946518 NA coding downstream 156228 23814596 ~ 23818032 (+)
LOC110488133 NA coding downstream 320998 23979350 ~ 23981983 (+)
LOC110488137 LOC106606710 coding downstream 386072 24044440 ~ 24059317 (+)
sdhaf3 LOC106570289 coding downstream 407460 24065828 ~ 24084386 (+)
G2308991 NA non-coding upstream 204881 23446151 ~ 23450031 (+)
G2308936 NA non-coding upstream 317217 23337496 ~ 23337695 (+)
G2308882 LOC106570315 non-coding upstream 418455 23235947 ~ 23236457 (+)
G2308873 arl4a non-coding upstream 430082 23222533 ~ 23224830 (+)
G2309185 NA non-coding downstream 184403 23842771 ~ 23843517 (+)
G2309190 NA non-coding downstream 191488 23849856 ~ 23860777 (+)
G2309216 NA non-coding downstream 240419 23898787 ~ 23925335 (+)
G2309237 NA non-coding downstream 261177 23919545 ~ 23921576 (+)
G2309242 NA non-coding downstream 274534 23932902 ~ 23933142 (+)
G2308224 NA other upstream 1050191 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 1238620 22405971 ~ 22416346 (+)
G2306825 NA other upstream 2067478 21587088 ~ 21587434 (+)
G2306688 NA other upstream 2331016 21320623 ~ 21323896 (+)
LOC110488072 LOC106570395 other upstream 2343034 21307432 ~ 21311878 (+)
LOC110488142 LOC106570295 other downstream 493319 24151527 ~ 24157473 (+)
G2311528 NA other downstream 2076826 25735194 ~ 25736847 (+)
G2311978 NA other downstream 2260784 25919152 ~ 25919800 (+)
G2312300 NA other downstream 2666784 26325152 ~ 26325383 (+)

Expression


Co-expression Network