G2309384 (LOC106570297)


Basic Information

Item Value
gene id G2309384
gene name LOC106570297
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 24169629 ~ 24170753 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2641703
TCTCAAACAAAGACCGGATGTTGCTCTTCACTGTCTCTGGGACAAAACCTGAGGGGAGCCTCTCTACTGTGTCATAGGCAGCGTGGTTGGGCTCCTGGGTGCAGCAGTGGAAGCGGTCCATCTGAATAGACCCTACCTTCCCTGTGGGCTTCAGGTCAAACACCTCAAAGTGTCCTGGGAGGAATGGAGTGATCTTAGGAGGTGAGGACATTGAGTGGGTGATATCAGTCAGACCTTTTGCCTCAGAGCACACAGCCAGGAAGCCGTCGTCAGTCAGTAGTTTGAACAAGGGCCGCACGCCATACGTATCCCTCCCCAGGAAAACCTTCCTATTGGCTGTGTCCAGGAGGACGAAGGCGAACACTCCATCCAATAGGGACGCCATCTTCTGAATGCCGAAGCGCTCATACAGGTGAAGCAGGATCTCACCATCTACTTTGGTCTGGTAGTCAGTA

Function

NR:

description
asparagine synthetase [glutamine-hydrolyzing]-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2641703 True 455 lncRNA 0.53 3 24169629 24170753

Neighbor

gene id symbol gene type direction distance location
LOC110488142 LOC106570295 coding upstream 12156 24151527 ~ 24157473 (+)
sdhaf3 LOC106570289 coding upstream 85243 24065828 ~ 24084386 (+)
LOC110488137 LOC106606710 coding upstream 110312 24044440 ~ 24059317 (+)
LOC110488133 NA coding upstream 187646 23979350 ~ 23981983 (+)
LOC118946518 NA coding upstream 351597 23814596 ~ 23818032 (+)
LOC110488145 LOC106570298 coding downstream 33017 24203770 ~ 24215296 (+)
ngly1 ngly1 coding downstream 239108 24409861 ~ 24420001 (+)
LOC110488151 LOC106570304 coding downstream 249421 24420174 ~ 24467243 (+)
LOC110488157 LOC106588669 coding downstream 626565 24797318 ~ 24915300 (+)
LOC110488160 LOC106588667 coding downstream 772674 24943427 ~ 24951969 (+)
G2309346 NA non-coding upstream 62517 24106224 ~ 24107112 (+)
G2309342 NA non-coding upstream 69793 24099564 ~ 24099836 (+)
G2309324 NA non-coding upstream 81514 24087692 ~ 24088115 (+)
G2309307 NA non-coding upstream 96624 24072597 ~ 24073005 (+)
G2309266 NA non-coding upstream 109509 24029073 ~ 24060120 (+)
G2309397 NA non-coding downstream 22776 24193529 ~ 24193971 (+)
G2309398 NA non-coding downstream 26235 24196988 ~ 24209748 (+)
G2309330 NA non-coding downstream 47133 24217886 ~ 24218828 (+)
G2309333 NA non-coding downstream 48205 24218958 ~ 24219844 (+)
G2309405 NA non-coding downstream 50251 24221004 ~ 24221240 (+)
G2308224 NA other upstream 1564908 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 1753337 22405971 ~ 22416346 (+)
G2306825 NA other upstream 2582195 21587088 ~ 21587434 (+)
G2311528 NA other downstream 1564441 25735194 ~ 25736847 (+)
G2311978 NA other downstream 1748399 25919152 ~ 25919800 (+)
G2312300 NA other downstream 2154399 26325152 ~ 26325383 (+)
G2312752 NA other downstream 2562551 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 2645931 26816398 ~ 26820899 (+)

Expression


Co-expression Network