G2309330


Basic Information

Item Value
gene id G2309330
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 24217886 ~ 24218828 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2641645
AGAGCAAAACATTTAAATTATAATAGCCTATCTAATAGGcccaattaaatgagagatgcTCATGGTAATTTGTTATATGGCTACTTCAGAAATATGAACTCATCGTAGCCAGAAAAGGTGCAATGGTTATGATATACACTGaatttacaaaacattaagaacaccttcctaatatcaaCTTGCACTCCccgttttgccctcagaacagcctcacttCAGGGacacatggactctacaaggtgtcgaaaatgTTCcccgggatgctggcccatgttgactccaatcctTCCCATCCTTCCATACcagtgtgtcaagttggctggatgtcctttgggtggtgaccCATTTTTgatacatgggaaactgttgagcttgaaaaacccagcagcattgcagttctggCTAACCTAgactcagagcatttcgtattattctgtacgtaaatctgtACGTAGACcctccatttcatatgatatgttacgtttcgtatgtaTTAATTGGTGGATGTCCATCATTTATTTCATATGAtttgttacgaattacaatttgtatggtattttacgaatttgcaaatagttagcatgttagctaactcttccccttaccataaccttaacccttcccctagccctaaccttaaccctttaacctagccatctagctaatgttagccacaacatattggaattcgtaacatatcacacATTTTTAAAGTACATAACATATTtagcaaagtagctaaaaagtagtaagtagttgaaaagttgctaattagctaaaatactaaagttgtccatgacgagatttgaacacacaacctttgggttgctagatcaAATTATATGCCCACCCaccttttgtttttgccttaggtAGCCTTTTGTCTtaagaatttaaaatggattccattGAGATCGTATCACTGGCtgacacacaacacccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2641645 True 943 lncRNA 0.38 1 24217886 24218828

Neighbor

gene id symbol gene type direction distance location
LOC110488145 LOC106570298 coding upstream 2590 24203770 ~ 24215296 (+)
LOC110488142 LOC106570295 coding upstream 60413 24151527 ~ 24157473 (+)
sdhaf3 LOC106570289 coding upstream 133500 24065828 ~ 24084386 (+)
LOC110488137 LOC106606710 coding upstream 158569 24044440 ~ 24059317 (+)
LOC110488133 NA coding upstream 235903 23979350 ~ 23981983 (+)
ngly1 ngly1 coding downstream 191033 24409861 ~ 24420001 (+)
LOC110488151 LOC106570304 coding downstream 201346 24420174 ~ 24467243 (+)
LOC110488157 LOC106588669 coding downstream 578490 24797318 ~ 24915300 (+)
LOC110488160 LOC106588667 coding downstream 724599 24943427 ~ 24951969 (+)
LOC110488162 LOC106570281 coding downstream 831467 25050295 ~ 25061664 (+)
G2309398 NA non-coding upstream 8138 24196988 ~ 24209748 (+)
G2309397 NA non-coding upstream 23915 24193529 ~ 24193971 (+)
G2309329 NA non-coding upstream 42492 24160495 ~ 24175394 (+)
G2309384 LOC106570297 non-coding upstream 47133 24169629 ~ 24170753 (+)
G2309346 NA non-coding upstream 110774 24106224 ~ 24107112 (+)
G2309333 NA non-coding downstream 130 24218958 ~ 24219844 (+)
G2309405 NA non-coding downstream 2176 24221004 ~ 24221240 (+)
G2309407 NA non-coding downstream 3874 24222702 ~ 24222970 (+)
G2309313 NA non-coding downstream 50827 24269655 ~ 24275723 (+)
G2309441 NA non-coding downstream 89825 24308653 ~ 24317153 (+)
G2308224 NA other upstream 1613165 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 1801594 22405971 ~ 22416346 (+)
G2306825 NA other upstream 2630452 21587088 ~ 21587434 (+)
G2311528 NA other downstream 1516366 25735194 ~ 25736847 (+)
G2311978 NA other downstream 1700324 25919152 ~ 25919800 (+)
G2312300 NA other downstream 2106324 26325152 ~ 26325383 (+)
G2312752 NA other downstream 2514476 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 2597856 26816398 ~ 26820899 (+)

Expression


Co-expression Network