G2309407


Basic Information

Item Value
gene id G2309407
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 24222702 ~ 24222970 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2641728
gggagatagaatgatggtcaaagataaaagtataagaaataaagtcaaaataaaacataataaaaagtctgtttgaatgacactgaggggcagtgtttttacagctaATGCTGGTTTGCCTGAGGATGATgcagtgcaggtgtttgtacacatgcatatgcaCACACTCTCATTCCAATACACACATATGtaaatagtgccagacatgcactcaAACATCTTACAGTCGAccttgctgttatgatttcagttgtccttgatgtccagTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2641728 True 269 lncRNA 0.38 1 24222702 24222970

Neighbor

gene id symbol gene type direction distance location
LOC110488145 LOC106570298 coding upstream 7406 24203770 ~ 24215296 (+)
LOC110488142 LOC106570295 coding upstream 65229 24151527 ~ 24157473 (+)
sdhaf3 LOC106570289 coding upstream 138316 24065828 ~ 24084386 (+)
LOC110488137 LOC106606710 coding upstream 163385 24044440 ~ 24059317 (+)
LOC110488133 NA coding upstream 240719 23979350 ~ 23981983 (+)
ngly1 ngly1 coding downstream 186891 24409861 ~ 24420001 (+)
LOC110488151 LOC106570304 coding downstream 197204 24420174 ~ 24467243 (+)
LOC110488157 LOC106588669 coding downstream 574348 24797318 ~ 24915300 (+)
LOC110488160 LOC106588667 coding downstream 720457 24943427 ~ 24951969 (+)
LOC110488162 LOC106570281 coding downstream 827325 25050295 ~ 25061664 (+)
G2309405 NA non-coding upstream 1462 24221004 ~ 24221240 (+)
G2309333 NA non-coding upstream 2858 24218958 ~ 24219844 (+)
G2309330 NA non-coding upstream 3874 24217886 ~ 24218828 (+)
G2309398 NA non-coding upstream 12954 24196988 ~ 24209748 (+)
G2309397 NA non-coding upstream 28731 24193529 ~ 24193971 (+)
G2309313 NA non-coding downstream 46685 24269655 ~ 24275723 (+)
G2309441 NA non-coding downstream 85683 24308653 ~ 24317153 (+)
G2309460 NA non-coding downstream 108651 24331621 ~ 24331820 (+)
G2309480 NA non-coding downstream 139930 24362900 ~ 24364320 (+)
G2309481 NA non-coding downstream 142695 24365665 ~ 24366163 (+)
G2308224 NA other upstream 1617981 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 1806410 22405971 ~ 22416346 (+)
G2306825 NA other upstream 2635268 21587088 ~ 21587434 (+)
G2311528 NA other downstream 1512224 25735194 ~ 25736847 (+)
G2311978 NA other downstream 1696182 25919152 ~ 25919800 (+)
G2312300 NA other downstream 2102182 26325152 ~ 26325383 (+)
G2312752 NA other downstream 2510334 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 2593714 26816398 ~ 26820899 (+)

Expression


Co-expression Network