G2309519


Basic Information

Item Value
gene id G2309519
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 24424409 ~ 24425018 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2641858
ggtaactctgggtcttccattcctgtggcggtcctcatgagagacagttaactgtaatgaacttatcctctgcagcagaggtaactctgggtcttccattcctgtggcggtcctcatgagagacagttaactgtaatgaacttatcctctgcagcagaggtaactctgggtcttccattcctgtggcggtcctcatgagagacagtttcatcaaaACGATtgtctgcacttgaagaaatgttctgcattgactgaccttcatgtcttaaagtaatgatggactgtcatttctctttgcttatttcagctgttcttgccataatacggacttggtTTTTAACCGAttggggctatcttctgtatacccccctaccttgtcacaatacaactgattagctcaaatgcattaagaaggaaggaaATTGCAAAAATTAgctttttaagaaggcacacatgttaattgaaatgcattccaggtgactacctcatgaaactggttgagagaatgccaagagtgtgcaaagctttcaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2641858 True 531 lncRNA 0.43 2 24424409 24425018

Neighbor

gene id symbol gene type direction distance location
ngly1 ngly1 coding upstream 4408 24409861 ~ 24420001 (+)
LOC110488145 LOC106570298 coding upstream 209113 24203770 ~ 24215296 (+)
LOC110488142 LOC106570295 coding upstream 266936 24151527 ~ 24157473 (+)
sdhaf3 LOC106570289 coding upstream 340023 24065828 ~ 24084386 (+)
LOC110488137 LOC106606710 coding upstream 365092 24044440 ~ 24059317 (+)
LOC110488157 LOC106588669 coding downstream 372300 24797318 ~ 24915300 (+)
LOC110488160 LOC106588667 coding downstream 518409 24943427 ~ 24951969 (+)
LOC110488162 LOC106570281 coding downstream 625277 25050295 ~ 25061664 (+)
mtf mtf coding downstream 641979 25066997 ~ 25083433 (+)
LOC110489411 LOC106570275 coding downstream 662349 25087367 ~ 25110258 (+)
G2309508 NA non-coding upstream 15884 24408274 ~ 24408525 (+)
G2309504 NA non-coding upstream 21240 24402906 ~ 24403169 (+)
G2309502 NA non-coding upstream 27046 24397004 ~ 24397363 (+)
G2309500 NA non-coding upstream 29206 24394901 ~ 24395203 (+)
G2309495 NA non-coding upstream 37474 24386685 ~ 24386935 (+)
G2309511 NA non-coding downstream 42448 24467466 ~ 24469607 (+)
G2309538 NA non-coding downstream 53827 24478845 ~ 24479072 (+)
G2309539 NA non-coding downstream 54320 24479338 ~ 24485024 (+)
G2309540 NA non-coding downstream 54889 24479907 ~ 24485959 (+)
G2309544 NA non-coding downstream 70626 24495644 ~ 24496050 (+)
LOC110488133 NA other upstream 443630 23979350 ~ 23981983 (+)
G2308224 NA other upstream 1819688 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 2008117 22405971 ~ 22416346 (+)
G2306825 NA other upstream 2836975 21587088 ~ 21587434 (+)
G2311528 NA other downstream 1310176 25735194 ~ 25736847 (+)
G2311978 NA other downstream 1494134 25919152 ~ 25919800 (+)
G2312300 NA other downstream 1900134 26325152 ~ 26325383 (+)
G2312752 NA other downstream 2308286 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 2391666 26816398 ~ 26820899 (+)

Expression


Co-expression Network