G2309546


Basic Information

Item Value
gene id G2309546
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 24497596 ~ 24497969 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2641892
gaatgtgatgaaagaaataaaagcagaaataaataaatatctccactattattctgacatttcacattcttaaaataaagtggtgatcctaactgacctaagacagggaatttttactaggattaaatgtcaggaattgtgaaaaactgagtttaaatgtatttggctaaggtgtatgtaaacttctgacttcaactgtaagtattcagtccctttgctatgggactcgaaattgagctcaggtgcatcctgtttccattgatcatccctgagatgtttctacaacttgattggagtccacctgtggtaaattcagttgattggacctgatttggaaaggcacacacctgtctatatagttgacggtgcatgtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2641892 True 374 lncRNA 0.37 1 24497596 24497969

Neighbor

gene id symbol gene type direction distance location
LOC110488151 LOC106570304 coding upstream 30353 24420174 ~ 24467243 (+)
ngly1 ngly1 coding upstream 77595 24409861 ~ 24420001 (+)
LOC110488145 LOC106570298 coding upstream 282300 24203770 ~ 24215296 (+)
LOC110488142 LOC106570295 coding upstream 340123 24151527 ~ 24157473 (+)
sdhaf3 LOC106570289 coding upstream 413210 24065828 ~ 24084386 (+)
LOC110488157 LOC106588669 coding downstream 299349 24797318 ~ 24915300 (+)
LOC110488160 LOC106588667 coding downstream 445458 24943427 ~ 24951969 (+)
LOC110488162 LOC106570281 coding downstream 552326 25050295 ~ 25061664 (+)
mtf mtf coding downstream 569028 25066997 ~ 25083433 (+)
LOC110489411 LOC106570275 coding downstream 589398 25087367 ~ 25110258 (+)
G2309544 NA non-coding upstream 1546 24495644 ~ 24496050 (+)
G2309540 NA non-coding upstream 11637 24479907 ~ 24485959 (+)
G2309539 NA non-coding upstream 12572 24479338 ~ 24485024 (+)
G2309538 NA non-coding upstream 18524 24478845 ~ 24479072 (+)
G2309511 NA non-coding upstream 27989 24467466 ~ 24469607 (+)
G2309547 NA non-coding downstream 1251 24499220 ~ 24499499 (+)
G2309556 NA non-coding downstream 20016 24517985 ~ 24518298 (+)
G2309580 NA non-coding downstream 59000 24556969 ~ 24557195 (+)
G2309591 NA non-coding downstream 72977 24570946 ~ 24571177 (+)
G2309603 LOC100136012 non-coding downstream 88022 24585991 ~ 24586302 (+)
LOC110488133 NA other upstream 516817 23979350 ~ 23981983 (+)
G2308224 NA other upstream 1892875 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 2081304 22405971 ~ 22416346 (+)
G2306825 NA other upstream 2910162 21587088 ~ 21587434 (+)
G2311528 NA other downstream 1237225 25735194 ~ 25736847 (+)
G2311978 NA other downstream 1421183 25919152 ~ 25919800 (+)
G2312300 NA other downstream 1827183 26325152 ~ 26325383 (+)
G2312752 NA other downstream 2235335 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 2318715 26816398 ~ 26820899 (+)

Expression


Co-expression Network