Gene
RNA
| Item | Value |
|---|---|
| gene id | G2309556 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 24517985 ~ 24518298 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2641902 | True | 314 | lncRNA | 0.42 | 1 | 24517985 | 24518298 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488151 | LOC106570304 | coding | upstream | 50742 | 24420174 ~ 24467243 (+) |
| ngly1 | ngly1 | coding | upstream | 97984 | 24409861 ~ 24420001 (+) |
| LOC110488145 | LOC106570298 | coding | upstream | 302689 | 24203770 ~ 24215296 (+) |
| LOC110488142 | LOC106570295 | coding | upstream | 360512 | 24151527 ~ 24157473 (+) |
| sdhaf3 | LOC106570289 | coding | upstream | 433599 | 24065828 ~ 24084386 (+) |
| LOC110488157 | LOC106588669 | coding | downstream | 279020 | 24797318 ~ 24915300 (+) |
| LOC110488160 | LOC106588667 | coding | downstream | 425129 | 24943427 ~ 24951969 (+) |
| LOC110488162 | LOC106570281 | coding | downstream | 531997 | 25050295 ~ 25061664 (+) |
| mtf | mtf | coding | downstream | 548699 | 25066997 ~ 25083433 (+) |
| LOC110489411 | LOC106570275 | coding | downstream | 569069 | 25087367 ~ 25110258 (+) |
| G2309547 | NA | non-coding | upstream | 18486 | 24499220 ~ 24499499 (+) |
| G2309546 | NA | non-coding | upstream | 20016 | 24497596 ~ 24497969 (+) |
| G2309544 | NA | non-coding | upstream | 21935 | 24495644 ~ 24496050 (+) |
| G2309540 | NA | non-coding | upstream | 32026 | 24479907 ~ 24485959 (+) |
| G2309539 | NA | non-coding | upstream | 32961 | 24479338 ~ 24485024 (+) |
| G2309580 | NA | non-coding | downstream | 38671 | 24556969 ~ 24557195 (+) |
| G2309591 | NA | non-coding | downstream | 52648 | 24570946 ~ 24571177 (+) |
| G2309603 | LOC100136012 | non-coding | downstream | 67693 | 24585991 ~ 24586302 (+) |
| G2309612 | NA | non-coding | downstream | 81044 | 24599342 ~ 24600122 (+) |
| G2309615 | NA | non-coding | downstream | 88440 | 24606738 ~ 24607057 (+) |
| LOC110488133 | NA | other | upstream | 537206 | 23979350 ~ 23981983 (+) |
| G2308224 | NA | other | upstream | 1913264 | 22604320 ~ 22604721 (+) |
| c32h5orf49 | cssa14h5orf49 | other | upstream | 2101693 | 22405971 ~ 22416346 (+) |
| G2306825 | NA | other | upstream | 2930551 | 21587088 ~ 21587434 (+) |
| G2311528 | NA | other | downstream | 1216896 | 25735194 ~ 25736847 (+) |
| G2311978 | NA | other | downstream | 1400854 | 25919152 ~ 25919800 (+) |
| G2312300 | NA | other | downstream | 1806854 | 26325152 ~ 26325383 (+) |
| G2312752 | NA | other | downstream | 2215006 | 26733304 ~ 26733645 (+) |
| LOC110488193 | LOC106570239 | other | downstream | 2298386 | 26816398 ~ 26820899 (+) |
