G2309580


Basic Information

Item Value
gene id G2309580
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 24556969 ~ 24557195 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2641926
gttggctatggagacatatgtcacggaatctctgagacaggggtacattcggccctccatgtcacctgtctcctcaagtttattttcttgtgaagaaaaaggagggaggactgcgtccgtgcattgattatcgaggtctaaattcgatcacagtgggatttagttatccgctacctctcatcgctacggcggtggaattaTTCCACGGAGCGCGTTTTTTCACgaac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106582599

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2641926 True 227 lncRNA 0.48 1 24556969 24557195

Neighbor

gene id symbol gene type direction distance location
LOC110488151 LOC106570304 coding upstream 89726 24420174 ~ 24467243 (+)
ngly1 ngly1 coding upstream 136968 24409861 ~ 24420001 (+)
LOC110488145 LOC106570298 coding upstream 341673 24203770 ~ 24215296 (+)
LOC110488142 LOC106570295 coding upstream 399496 24151527 ~ 24157473 (+)
sdhaf3 LOC106570289 coding upstream 472583 24065828 ~ 24084386 (+)
LOC110488157 LOC106588669 coding downstream 240123 24797318 ~ 24915300 (+)
LOC110488160 LOC106588667 coding downstream 386232 24943427 ~ 24951969 (+)
LOC110488162 LOC106570281 coding downstream 493100 25050295 ~ 25061664 (+)
mtf mtf coding downstream 509802 25066997 ~ 25083433 (+)
LOC110489411 LOC106570275 coding downstream 530172 25087367 ~ 25110258 (+)
G2309556 NA non-coding upstream 38671 24517985 ~ 24518298 (+)
G2309547 NA non-coding upstream 57470 24499220 ~ 24499499 (+)
G2309546 NA non-coding upstream 59000 24497596 ~ 24497969 (+)
G2309544 NA non-coding upstream 60919 24495644 ~ 24496050 (+)
G2309540 NA non-coding upstream 71010 24479907 ~ 24485959 (+)
G2309591 NA non-coding downstream 13751 24570946 ~ 24571177 (+)
G2309603 LOC100136012 non-coding downstream 28796 24585991 ~ 24586302 (+)
G2309612 NA non-coding downstream 42147 24599342 ~ 24600122 (+)
G2309615 NA non-coding downstream 49543 24606738 ~ 24607057 (+)
G2309617 NA non-coding downstream 51152 24608347 ~ 24608557 (+)
LOC110488133 NA other upstream 576190 23979350 ~ 23981983 (+)
G2308224 NA other upstream 1952248 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 2140677 22405971 ~ 22416346 (+)
G2306825 NA other upstream 2969535 21587088 ~ 21587434 (+)
G2311528 NA other downstream 1177999 25735194 ~ 25736847 (+)
G2311978 NA other downstream 1361957 25919152 ~ 25919800 (+)
G2312300 NA other downstream 1767957 26325152 ~ 26325383 (+)
G2312752 NA other downstream 2176109 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 2259489 26816398 ~ 26820899 (+)

Expression


Co-expression Network