G2309603 (LOC100136012)


Basic Information

Item Value
gene id G2309603
gene name LOC100136012
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 24585991 ~ 24586302 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2641949
tggacaataggcaagcagcttggtgagaaggcaacaactgttggcgcaattattagaaaatggaagaagttcaagatgacggtcaatcaccctcggtctggggctccatgcaagatctcacctcgtggggcatcaatgatcatgaggaaggtgagggattagcccagaactacacggcaggacctggtcaatgacatgaagagagctgggaccacagtctcaaagaaaaccattagtaacacactacgccgtcatggattaaaatcctgcagcgcacgcaaggtccccctgctcaagccaacgCATGTCCAg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2641949 True 312 lncRNA 0.51 1 24585991 24586302

Neighbor

gene id symbol gene type direction distance location
LOC110488151 LOC106570304 coding upstream 118748 24420174 ~ 24467243 (+)
ngly1 ngly1 coding upstream 165990 24409861 ~ 24420001 (+)
LOC110488145 LOC106570298 coding upstream 370695 24203770 ~ 24215296 (+)
LOC110488142 LOC106570295 coding upstream 428518 24151527 ~ 24157473 (+)
sdhaf3 LOC106570289 coding upstream 501605 24065828 ~ 24084386 (+)
LOC110488157 LOC106588669 coding downstream 211016 24797318 ~ 24915300 (+)
LOC110488160 LOC106588667 coding downstream 357125 24943427 ~ 24951969 (+)
LOC110488162 LOC106570281 coding downstream 463993 25050295 ~ 25061664 (+)
mtf mtf coding downstream 480695 25066997 ~ 25083433 (+)
LOC110489411 LOC106570275 coding downstream 501065 25087367 ~ 25110258 (+)
G2309591 NA non-coding upstream 14814 24570946 ~ 24571177 (+)
G2309580 NA non-coding upstream 28796 24556969 ~ 24557195 (+)
G2309556 NA non-coding upstream 67693 24517985 ~ 24518298 (+)
G2309547 NA non-coding upstream 86492 24499220 ~ 24499499 (+)
G2309546 NA non-coding upstream 88022 24497596 ~ 24497969 (+)
G2309612 NA non-coding downstream 13040 24599342 ~ 24600122 (+)
G2309615 NA non-coding downstream 20436 24606738 ~ 24607057 (+)
G2309617 NA non-coding downstream 22045 24608347 ~ 24608557 (+)
G2309618 NA non-coding downstream 26244 24612546 ~ 24612783 (+)
G2309628 NA non-coding downstream 44079 24630381 ~ 24630864 (+)
LOC110488133 NA other upstream 605212 23979350 ~ 23981983 (+)
G2308224 NA other upstream 1981270 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 2169699 22405971 ~ 22416346 (+)
G2306825 NA other upstream 2998557 21587088 ~ 21587434 (+)
G2311528 NA other downstream 1148892 25735194 ~ 25736847 (+)
G2311978 NA other downstream 1332850 25919152 ~ 25919800 (+)
G2312300 NA other downstream 1738850 26325152 ~ 26325383 (+)
G2312752 NA other downstream 2147002 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 2230382 26816398 ~ 26820899 (+)

Expression


Co-expression Network