G2309612


Basic Information

Item Value
gene id G2309612
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 24599342 ~ 24600122 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2641959
gaagcacttgtgctgaggagagccttcaggtgagaaagggtcttcagggaccggttggacccactggccttccctgatgaccatctatatgaaagatacaggttttctgcagatggcatcaggtatctatgcagactactgggtcccaggattaagcaccgcactgcacggagccatgcactgagtgtggagcaaatggtttgtgtggccttgcgcttttttgctagtggagccttcctgtactcagtgggggatgcagaacagctgaacaaggccacaatttgccacacaataaggagtgtgtgtctggctatcaaagcattagcagatgtcttcatctccttccctggccacagaagactctgtgacatcaaagaggagttctataggattgcagatggtctgcaatgctgactgtgtgatcagcaatgttgtggcaaaatggcctggctcagtccatgactccagaatctttcgggcctctgaaatctatcagtgcc

Function

NR:

description
PREDICTED: putative nuclease HARBI1 isoform X3

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2641959 True 500 lncRNA 0.50 2 24599342 24600122

Neighbor

gene id symbol gene type direction distance location
LOC110488151 LOC106570304 coding upstream 132099 24420174 ~ 24467243 (+)
ngly1 ngly1 coding upstream 179341 24409861 ~ 24420001 (+)
LOC110488145 LOC106570298 coding upstream 384046 24203770 ~ 24215296 (+)
LOC110488142 LOC106570295 coding upstream 441869 24151527 ~ 24157473 (+)
sdhaf3 LOC106570289 coding upstream 514956 24065828 ~ 24084386 (+)
LOC110488157 LOC106588669 coding downstream 197196 24797318 ~ 24915300 (+)
LOC110488160 LOC106588667 coding downstream 343305 24943427 ~ 24951969 (+)
LOC110488162 LOC106570281 coding downstream 450173 25050295 ~ 25061664 (+)
mtf mtf coding downstream 466875 25066997 ~ 25083433 (+)
LOC110489411 LOC106570275 coding downstream 487245 25087367 ~ 25110258 (+)
G2309603 LOC100136012 non-coding upstream 13040 24585991 ~ 24586302 (+)
G2309591 NA non-coding upstream 28165 24570946 ~ 24571177 (+)
G2309580 NA non-coding upstream 42147 24556969 ~ 24557195 (+)
G2309556 NA non-coding upstream 81044 24517985 ~ 24518298 (+)
G2309547 NA non-coding upstream 99843 24499220 ~ 24499499 (+)
G2309615 NA non-coding downstream 6616 24606738 ~ 24607057 (+)
G2309617 NA non-coding downstream 8225 24608347 ~ 24608557 (+)
G2309618 NA non-coding downstream 12424 24612546 ~ 24612783 (+)
G2309628 NA non-coding downstream 30259 24630381 ~ 24630864 (+)
G2309629 NA non-coding downstream 31239 24631361 ~ 24631566 (+)
LOC110488133 NA other upstream 618563 23979350 ~ 23981983 (+)
G2308224 NA other upstream 1994621 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 2183050 22405971 ~ 22416346 (+)
G2306825 NA other upstream 3011908 21587088 ~ 21587434 (+)
G2311528 NA other downstream 1135072 25735194 ~ 25736847 (+)
G2311978 NA other downstream 1319030 25919152 ~ 25919800 (+)
G2312300 NA other downstream 1725030 26325152 ~ 26325383 (+)
G2312752 NA other downstream 2133182 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 2216562 26816398 ~ 26820899 (+)

Expression


Co-expression Network