G2309628


Basic Information

Item Value
gene id G2309628
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 24630381 ~ 24630864 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2641976
aaactgaacactgaatgacaaaaaacaacaaagagaatgaacgacACGAAACAATCCTGTAAGGTGAAAAAACACAAAACCGGaaacaactacacacaaacacaggtgggaacaggctacctaagtatggttctcaatcagagacaacgattgacagctgcctctgattgggaaccataccaggccaaacacatagaaatacaacacacagaacaaaacatagaatgcccaccccaactcacgccctgaccaaaccaaaatagagacataaaaaaggaactaaggtcaggacgtgacactatTGAGCTCACAAGCAACGAATgaatctattattatggtgggagattataatacggtgttaagtacctcaatggatcGTAAAAGAAATTACACTACAAACTATCCCCCTCATGCACTTAAGGAGATCACACATATCATGGATACATTAGAACTAGTGGCTATATGGAGGCTGAAAaccctgacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2641976 True 484 lncRNA 0.41 1 24630381 24630864

Neighbor

gene id symbol gene type direction distance location
LOC110488151 LOC106570304 coding upstream 163138 24420174 ~ 24467243 (+)
ngly1 ngly1 coding upstream 210380 24409861 ~ 24420001 (+)
LOC110488145 LOC106570298 coding upstream 415085 24203770 ~ 24215296 (+)
LOC110488142 LOC106570295 coding upstream 472908 24151527 ~ 24157473 (+)
sdhaf3 LOC106570289 coding upstream 545995 24065828 ~ 24084386 (+)
LOC110488157 LOC106588669 coding downstream 166454 24797318 ~ 24915300 (+)
LOC110488160 LOC106588667 coding downstream 312563 24943427 ~ 24951969 (+)
LOC110488162 LOC106570281 coding downstream 419431 25050295 ~ 25061664 (+)
mtf mtf coding downstream 436133 25066997 ~ 25083433 (+)
LOC110489411 LOC106570275 coding downstream 456503 25087367 ~ 25110258 (+)
G2309618 NA non-coding upstream 17598 24612546 ~ 24612783 (+)
G2309617 NA non-coding upstream 21824 24608347 ~ 24608557 (+)
G2309615 NA non-coding upstream 23324 24606738 ~ 24607057 (+)
G2309612 NA non-coding upstream 30259 24599342 ~ 24600122 (+)
G2309603 LOC100136012 non-coding upstream 44079 24585991 ~ 24586302 (+)
G2309629 NA non-coding downstream 497 24631361 ~ 24631566 (+)
G2309631 NA non-coding downstream 3320 24634184 ~ 24634412 (+)
G2309642 NA non-coding downstream 20821 24651685 ~ 24652029 (+)
G2309671 NA non-coding downstream 64467 24695331 ~ 24695936 (+)
G2309682 NA non-coding downstream 80574 24711438 ~ 24711726 (+)
LOC110488133 NA other upstream 649602 23979350 ~ 23981983 (+)
G2308224 NA other upstream 2025660 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 2214089 22405971 ~ 22416346 (+)
G2306825 NA other upstream 3042947 21587088 ~ 21587434 (+)
G2311528 NA other downstream 1104330 25735194 ~ 25736847 (+)
G2311978 NA other downstream 1288288 25919152 ~ 25919800 (+)
G2312300 NA other downstream 1694288 26325152 ~ 26325383 (+)
G2312752 NA other downstream 2102440 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 2185820 26816398 ~ 26820899 (+)

Expression


Co-expression Network