G2309642


Basic Information

Item Value
gene id G2309642
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 24651685 ~ 24652029 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2641990
GAAGCCGTGAAAGAAGATTATATAATATTGTCAGAAAacgctgtgtaaggactattctTTAGCTTTTTCATTTGTCTGAAGAGAAGATGATATCTTGCATAAAGGGCCTCTTTTATAAAAGCATCACAAAGCATATTTTGGAAAGATACACCTTCTAATCTAGACAATATTGATTTGAAGAGTAACTCAACACAAAGCTTAGATGATTGAACAACAAATTTCTTTTGTCGAGACATTCTTCAATTACAAAATGCTCCTATAACCTTGAGTATTCTGCAATATTAACCGATTTTCATACTCTATCATTGGGGTATTACTACTGAATTATACTTAGTGGTGCACAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2641990 True 345 lncRNA 0.33 1 24651685 24652029

Neighbor

gene id symbol gene type direction distance location
LOC110488151 LOC106570304 coding upstream 184442 24420174 ~ 24467243 (+)
ngly1 ngly1 coding upstream 231684 24409861 ~ 24420001 (+)
LOC110488145 LOC106570298 coding upstream 436389 24203770 ~ 24215296 (+)
LOC110488142 LOC106570295 coding upstream 494212 24151527 ~ 24157473 (+)
sdhaf3 LOC106570289 coding upstream 567299 24065828 ~ 24084386 (+)
LOC110488157 LOC106588669 coding downstream 145289 24797318 ~ 24915300 (+)
LOC110488160 LOC106588667 coding downstream 291398 24943427 ~ 24951969 (+)
LOC110488162 LOC106570281 coding downstream 398266 25050295 ~ 25061664 (+)
mtf mtf coding downstream 414968 25066997 ~ 25083433 (+)
LOC110489411 LOC106570275 coding downstream 435338 25087367 ~ 25110258 (+)
G2309631 NA non-coding upstream 17273 24634184 ~ 24634412 (+)
G2309629 NA non-coding upstream 20119 24631361 ~ 24631566 (+)
G2309628 NA non-coding upstream 20821 24630381 ~ 24630864 (+)
G2309618 NA non-coding upstream 38902 24612546 ~ 24612783 (+)
G2309617 NA non-coding upstream 43128 24608347 ~ 24608557 (+)
G2309671 NA non-coding downstream 43302 24695331 ~ 24695936 (+)
G2309682 NA non-coding downstream 59409 24711438 ~ 24711726 (+)
G2309696 NA non-coding downstream 82150 24734179 ~ 24734420 (+)
G2309700 NA non-coding downstream 85611 24737640 ~ 24737889 (+)
G2309701 NA non-coding downstream 86409 24738438 ~ 24738703 (+)
LOC110488133 NA other upstream 670906 23979350 ~ 23981983 (+)
G2308224 NA other upstream 2046964 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 2235393 22405971 ~ 22416346 (+)
G2306825 NA other upstream 3064251 21587088 ~ 21587434 (+)
G2311528 NA other downstream 1083165 25735194 ~ 25736847 (+)
G2311978 NA other downstream 1267123 25919152 ~ 25919800 (+)
G2312300 NA other downstream 1673123 26325152 ~ 26325383 (+)
G2312752 NA other downstream 2081275 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 2164655 26816398 ~ 26820899 (+)

Expression


Co-expression Network