G2309701


Basic Information

Item Value
gene id G2309701
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 24738438 ~ 24738703 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2642049
tgaaagtcactgagctcttcagtacagtcattctactgccaatgtttgtctttggagattgcatgcctatgtgctcgatttttatacacctgtcagcaacgggtgtggctgaagtagccgaatccactcatttgaaggcgtgtccacatacttttggtgtaAATGCCAATAGCAAAGTGTCTTTAGAACAAAAGCAAAGCAAAAGCAAAGTGTCCATACATACAAAGTAGGTATGGACATACATACAAAGCCTACATAGGTTACAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2642049 True 266 lncRNA 0.41 1 24738438 24738703

Neighbor

gene id symbol gene type direction distance location
LOC110488151 LOC106570304 coding upstream 271195 24420174 ~ 24467243 (+)
ngly1 ngly1 coding upstream 318437 24409861 ~ 24420001 (+)
LOC110488145 LOC106570298 coding upstream 523142 24203770 ~ 24215296 (+)
LOC110488142 LOC106570295 coding upstream 580965 24151527 ~ 24157473 (+)
sdhaf3 LOC106570289 coding upstream 654052 24065828 ~ 24084386 (+)
LOC110488157 LOC106588669 coding downstream 58615 24797318 ~ 24915300 (+)
LOC110488160 LOC106588667 coding downstream 204724 24943427 ~ 24951969 (+)
LOC110488162 LOC106570281 coding downstream 311592 25050295 ~ 25061664 (+)
mtf mtf coding downstream 328294 25066997 ~ 25083433 (+)
LOC110489411 LOC106570275 coding downstream 348664 25087367 ~ 25110258 (+)
G2309700 NA non-coding upstream 549 24737640 ~ 24737889 (+)
G2309696 NA non-coding upstream 4018 24734179 ~ 24734420 (+)
G2309682 NA non-coding upstream 26712 24711438 ~ 24711726 (+)
G2309671 NA non-coding upstream 42502 24695331 ~ 24695936 (+)
G2309642 NA non-coding upstream 86409 24651685 ~ 24652029 (+)
G2309703 NA non-coding downstream 1547 24740250 ~ 24740478 (+)
G2309741 NA non-coding downstream 43970 24782673 ~ 24783506 (+)
G2309779 NA non-coding downstream 182332 24921035 ~ 24924214 (+)
G2309805 NA non-coding downstream 251698 24990401 ~ 24999060 (+)
G2309886 NA non-coding downstream 415431 25154134 ~ 25154344 (+)
LOC110488133 NA other upstream 757659 23979350 ~ 23981983 (+)
G2308224 NA other upstream 2133717 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 2322146 22405971 ~ 22416346 (+)
G2306825 NA other upstream 3151004 21587088 ~ 21587434 (+)
G2311528 NA other downstream 996491 25735194 ~ 25736847 (+)
G2311978 NA other downstream 1180449 25919152 ~ 25919800 (+)
G2312300 NA other downstream 1586449 26325152 ~ 26325383 (+)
G2312752 NA other downstream 1994601 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 2077981 26816398 ~ 26820899 (+)

Expression


Co-expression Network