G2309805


Basic Information

Item Value
gene id G2309805
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 24990401 ~ 24999060 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2642169
agggcaaaatctttgcttgctttattgactttaaaaaagcatttgattcgatttggcacgaagggctattctacaaaattctacaaagtgggcttggtggtaaggtgtatgacttaataaaatgtatgtacacagaaaacaagtgtgcaataaaaatcaaaaaccaaagaacataatttttttcacaatgtcgaggtgtgagacaaggctgcaatttgagtccaaatcttttcaacatttatatcaatgaattagcagacatgttggaccaatctccagccccaggactcacactatttgacacagaggtgaaatacctgctatatgctgatgacttggtacttctatcaccaaccaaagaaggtcttcaacaaaacattaatattctggagcaatattgccataattgggccctggcagtaaatttccaaaaaactaaaatcatgattttccaaaaaaaaaaacagatgtcagaaacacaaatgtaaattcaccctgaacaacaccttaattgaacacactaaaaattacacctaccttggtctgaccatatctgcatcgggaaactttaatatggcagtgaatgcactcaaagaaaaagcccgcagagcaatgtatgcaataaaaatgaaattattcaaaatcaacatcccaattagaatttggactaaaatatttgacagtgtaatcctaccaatagcactttatggaagtgaggtttgggggccactcaataaactggattttaaaatgtgggacaaacatccaattgaagccctacatgcagaattctgtcggaaaattctacaagtccagagaaatacaccaactaatgca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2642169 True 837 lncRNA 0.36 2 24990401 24999060

Neighbor

gene id symbol gene type direction distance location
LOC110488160 LOC106588667 coding upstream 38432 24943427 ~ 24951969 (+)
LOC110488157 LOC106588669 coding upstream 75101 24797318 ~ 24915300 (+)
LOC110488151 LOC106570304 coding upstream 523158 24420174 ~ 24467243 (+)
ngly1 ngly1 coding upstream 570400 24409861 ~ 24420001 (+)
LOC110488145 LOC106570298 coding upstream 775105 24203770 ~ 24215296 (+)
LOC110488162 LOC106570281 coding downstream 51235 25050295 ~ 25061664 (+)
mtf mtf coding downstream 67937 25066997 ~ 25083433 (+)
LOC110489411 LOC106570275 coding downstream 88307 25087367 ~ 25110258 (+)
LOC110488164 LOC106570276 coding downstream 116235 25115295 ~ 25133431 (+)
LOC110488166 LOC106570277 coding downstream 136785 25135845 ~ 25145239 (+)
G2309779 NA non-coding upstream 66187 24921035 ~ 24924214 (+)
G2309741 NA non-coding upstream 206895 24782673 ~ 24783506 (+)
G2309703 NA non-coding upstream 249923 24740250 ~ 24740478 (+)
G2309701 NA non-coding upstream 251698 24738438 ~ 24738703 (+)
G2309700 NA non-coding upstream 252512 24737640 ~ 24737889 (+)
G2309886 NA non-coding downstream 155074 25154134 ~ 25154344 (+)
G2309895 NA non-coding downstream 171164 25170224 ~ 25170474 (+)
G2309897 NA non-coding downstream 185267 25184327 ~ 25184575 (+)
G2309900 NA non-coding downstream 190056 25189116 ~ 25189319 (+)
G2309913 NA non-coding downstream 209761 25208821 ~ 25209125 (+)
LOC110488142 LOC106570295 other upstream 832965 24151527 ~ 24157473 (+)
LOC110488133 NA other upstream 1009622 23979350 ~ 23981983 (+)
G2308224 NA other upstream 2385680 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 2574109 22405971 ~ 22416346 (+)
G2306825 NA other upstream 3402967 21587088 ~ 21587434 (+)
G2311528 NA other downstream 736134 25735194 ~ 25736847 (+)
G2311978 NA other downstream 920092 25919152 ~ 25919800 (+)
G2312300 NA other downstream 1326092 26325152 ~ 26325383 (+)
G2312752 NA other downstream 1734244 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 1817624 26816398 ~ 26820899 (+)

Expression


Co-expression Network