G2309897


Basic Information

Item Value
gene id G2309897
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 25184327 ~ 25184575 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2642267
CAACAACCAtgtatttggtatttggtatctggtattttattaggatccccaatagctgttgcaaaagcagcagctcctcttcctggggtccaaacaaaaaatgaaacacaatacagaatgacacaatacagaacatcattagacaagaacagctcaaggacagaactatcAGTGCATTGGCACTGATAGAGCTACAATAGACAAATCACACCCAATCTTTCACGTCACATATACAGAGATGTATATAAC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2642267 True 249 lncRNA 0.39 1 25184327 25184575

Neighbor

gene id symbol gene type direction distance location
LOC110488166 LOC106570277 coding upstream 39088 25135845 ~ 25145239 (+)
LOC110488164 LOC106570276 coding upstream 50896 25115295 ~ 25133431 (+)
LOC110489411 LOC106570275 coding upstream 74069 25087367 ~ 25110258 (+)
mtf mtf coding upstream 100894 25066997 ~ 25083433 (+)
LOC110488162 LOC106570281 coding upstream 122663 25050295 ~ 25061664 (+)
LOC118946545 slfnl1 coding downstream 152443 25337018 ~ 25352457 (+)
LOC110488169 ctps1 coding downstream 252983 25437558 ~ 25452596 (+)
LOC110488170 LOC106570265 coding downstream 275132 25459707 ~ 25461881 (+)
LOC118946553 NA coding downstream 287821 25472396 ~ 25472531 (+)
LOC110488172 LOC106570264 coding downstream 287866 25472441 ~ 25479936 (+)
G2309895 NA non-coding upstream 13853 25170224 ~ 25170474 (+)
G2309886 NA non-coding upstream 29983 25154134 ~ 25154344 (+)
G2309805 NA non-coding upstream 185267 24990401 ~ 24999060 (+)
G2309779 NA non-coding upstream 260113 24921035 ~ 24924214 (+)
G2309741 NA non-coding upstream 400821 24782673 ~ 24783506 (+)
G2309900 NA non-coding downstream 4541 25189116 ~ 25189319 (+)
G2309913 NA non-coding downstream 24246 25208821 ~ 25209125 (+)
G2309914 NA non-coding downstream 26583 25211158 ~ 25211446 (+)
LOC110488167 foxo6 non-coding downstream 29035 25155686 ~ 25216037 (+)
G2309888 NA non-coding downstream 31918 25216493 ~ 25218324 (+)
LOC110488142 LOC106570295 other upstream 1026891 24151527 ~ 24157473 (+)
LOC110488133 NA other upstream 1203548 23979350 ~ 23981983 (+)
G2308224 NA other upstream 2579606 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 2768035 22405971 ~ 22416346 (+)
G2306825 NA other upstream 3596893 21587088 ~ 21587434 (+)
G2311528 NA other downstream 550619 25735194 ~ 25736847 (+)
G2311978 NA other downstream 734577 25919152 ~ 25919800 (+)
G2312300 NA other downstream 1140577 26325152 ~ 26325383 (+)
G2312752 NA other downstream 1548729 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 1632109 26816398 ~ 26820899 (+)

Expression


Co-expression Network