G2309900


Basic Information

Item Value
gene id G2309900
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 25189116 ~ 25189319 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2642270
ctttactacaTTCTCTCCTCTGTATTCCTCCTTCtgtcttctctcctttctttctgtcCGTCTACTATGGTCATGTCTCATGGGGAAGAGAGTTGGCAAGAAGCAGGCTTGCTACCATGGAAACAGGaaccctccctctcccacagGTCTCCTTAGCAACTGGTAGCTTGGCATTGTAGTAATGAGCAGACCCAGTGTGCCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2642270 True 204 lncRNA 0.50 1 25189116 25189319

Neighbor

gene id symbol gene type direction distance location
LOC110488166 LOC106570277 coding upstream 43877 25135845 ~ 25145239 (+)
LOC110488164 LOC106570276 coding upstream 55685 25115295 ~ 25133431 (+)
LOC110489411 LOC106570275 coding upstream 78858 25087367 ~ 25110258 (+)
mtf mtf coding upstream 105683 25066997 ~ 25083433 (+)
LOC110488162 LOC106570281 coding upstream 127452 25050295 ~ 25061664 (+)
LOC118946545 slfnl1 coding downstream 147699 25337018 ~ 25352457 (+)
LOC110488169 ctps1 coding downstream 248239 25437558 ~ 25452596 (+)
LOC110488170 LOC106570265 coding downstream 270388 25459707 ~ 25461881 (+)
LOC118946553 NA coding downstream 283077 25472396 ~ 25472531 (+)
LOC110488172 LOC106570264 coding downstream 283122 25472441 ~ 25479936 (+)
G2309897 NA non-coding upstream 4541 25184327 ~ 25184575 (+)
G2309895 NA non-coding upstream 18642 25170224 ~ 25170474 (+)
G2309886 NA non-coding upstream 34772 25154134 ~ 25154344 (+)
G2309805 NA non-coding upstream 190056 24990401 ~ 24999060 (+)
G2309779 NA non-coding upstream 264902 24921035 ~ 24924214 (+)
G2309913 NA non-coding downstream 19502 25208821 ~ 25209125 (+)
G2309914 NA non-coding downstream 21839 25211158 ~ 25211446 (+)
LOC110488167 foxo6 non-coding downstream 24291 25155686 ~ 25216037 (+)
G2309888 NA non-coding downstream 27174 25216493 ~ 25218324 (+)
G2309887 NA non-coding downstream 29124 25218443 ~ 25219645 (+)
LOC110488142 LOC106570295 other upstream 1031680 24151527 ~ 24157473 (+)
LOC110488133 NA other upstream 1208337 23979350 ~ 23981983 (+)
G2308224 NA other upstream 2584395 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 2772824 22405971 ~ 22416346 (+)
G2306825 NA other upstream 3601682 21587088 ~ 21587434 (+)
G2311528 NA other downstream 545875 25735194 ~ 25736847 (+)
G2311978 NA other downstream 729833 25919152 ~ 25919800 (+)
G2312300 NA other downstream 1135833 26325152 ~ 26325383 (+)
G2312752 NA other downstream 1543985 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 1627365 26816398 ~ 26820899 (+)

Expression


Co-expression Network