G2309932


Basic Information

Item Value
gene id G2309932
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 25252037 ~ 25252277 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2642302
gaaaagtgtgtgtgttccctgtcAGTGTTTGTacggctctgtgtgtgtgtctgcatctcAACAATTAGTGAGGTGTAATTGACTGAGGCAGGTGATTGTCACCGATTACTGCAATGATGGATAGGCGTGTCACTcaagagtgtgtgggtgtgtgactgagtgtgtgtacCGCTGCTTGTGTATTACTGTAATGGCAGCTCAGCTTTGATGGTGCATTACCGGTTGGTGATGAGCGTATGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2642302 True 241 lncRNA 0.48 1 25252037 25252277

Neighbor

gene id symbol gene type direction distance location
LOC110488167 foxo6 coding upstream 36000 25155686 ~ 25216037 (+)
LOC110488166 LOC106570277 coding upstream 106798 25135845 ~ 25145239 (+)
LOC110488164 LOC106570276 coding upstream 118606 25115295 ~ 25133431 (+)
LOC110489411 LOC106570275 coding upstream 141779 25087367 ~ 25110258 (+)
mtf mtf coding upstream 168604 25066997 ~ 25083433 (+)
LOC118946545 slfnl1 coding downstream 84741 25337018 ~ 25352457 (+)
LOC110488169 ctps1 coding downstream 185281 25437558 ~ 25452596 (+)
LOC110488170 LOC106570265 coding downstream 207430 25459707 ~ 25461881 (+)
LOC118946553 NA coding downstream 220119 25472396 ~ 25472531 (+)
LOC110488172 LOC106570264 coding downstream 220164 25472441 ~ 25479936 (+)
G2309930 NA non-coding upstream 1739 25250099 ~ 25250298 (+)
G2309919 NA non-coding upstream 18569 25233229 ~ 25233468 (+)
G2309887 NA non-coding upstream 32392 25218443 ~ 25219645 (+)
G2309888 NA non-coding upstream 33713 25216493 ~ 25218324 (+)
G2309934 NA non-coding downstream 1225 25253502 ~ 25253717 (+)
G2309936 NA non-coding downstream 2022 25254299 ~ 25254532 (+)
G2309942 NA non-coding downstream 6862 25259139 ~ 25259464 (+)
G2309948 NA non-coding downstream 11535 25263812 ~ 25264064 (+)
G2309950 NA non-coding downstream 13605 25265882 ~ 25266098 (+)
LOC110488142 LOC106570295 other upstream 1094601 24151527 ~ 24157473 (+)
LOC110488133 NA other upstream 1271258 23979350 ~ 23981983 (+)
G2308224 NA other upstream 2647316 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 2835745 22405971 ~ 22416346 (+)
G2306825 NA other upstream 3664603 21587088 ~ 21587434 (+)
G2311528 NA other downstream 482917 25735194 ~ 25736847 (+)
G2311978 NA other downstream 666875 25919152 ~ 25919800 (+)
G2312300 NA other downstream 1072875 26325152 ~ 26325383 (+)
G2312752 NA other downstream 1481027 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 1564407 26816398 ~ 26820899 (+)

Expression


Co-expression Network