G2311978


Basic Information

Item Value
gene id G2311978
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 25919152 ~ 25919800 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2644579
tctatgtcttacctgtgtgttgacattaaaggactctgtttttgttaaaccgcttttgggtcctcactcacgtgcataacagaagaatctgaccaagaatggacccagcgacttcggatcctctccactcagccgtcgagatccagggagcgatgctaggcagacacgagcaggaattgtctgctgctcaacatgccgttgagaccctggccgcccaagtctccaacctcacagaacagattcaccatctccgcctcgatccaccggccacttccagggctttcgaatctccggagcccagaatcaataacccgccgtgttactctggggagcccactgaatgccgctcgttcctcacccagtgtgatattgtgttttctctccagcccaacacttactccaggagcacagctcgtatcgcctacgtcatatctctccttactggacgggctcgtgagtggggcacggcaatctgggaggcgagggctgagtgtactaaccagtatcaggactttaaggaggagatgatacgggtttttgatcgttctgtttttggggaggaggcttccagggtcctgtcttccctatgtcaaggtaatcgatccataacagattactctattgagtttcgcactcttgctgcctccag

Function

NR:

description
PREDICTED: protein LDOC1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2644579 True 649 TUCP 0.52 1 25919152 25919800

Neighbor

gene id symbol gene type direction distance location
LOC110489412 LOC106570261 coding upstream 134334 25496044 ~ 25784818 (+)
LOC110488172 LOC106570264 coding upstream 439216 25472441 ~ 25479936 (+)
LOC118946553 NA coding upstream 446621 25472396 ~ 25472531 (+)
LOC110488170 LOC106570265 coding upstream 457271 25459707 ~ 25461881 (+)
LOC110488169 ctps1 coding upstream 466556 25437558 ~ 25452596 (+)
LOC118946515 LOC106595335 coding downstream 127980 26047780 ~ 26052231 (+)
LOC110488177 LOC106595335 coding downstream 137053 26056853 ~ 26061300 (+)
LOC118946509 LOC106595335 coding downstream 146136 26065936 ~ 26070380 (+)
LOC118946546 LOC106595335 coding downstream 155292 26075092 ~ 26076796 (+)
LOC118946516 LOC106595335 coding downstream 157138 26076938 ~ 26079433 (+)
G2311897 NA non-coding upstream 50430 25868325 ~ 25868722 (+)
G2311880 NA non-coding upstream 73105 25845846 ~ 25846047 (+)
G2311875 NA non-coding upstream 75854 25843098 ~ 25843298 (+)
G2311336 NA non-coding upstream 452639 25462753 ~ 25466513 (+)
G2309950 NA non-coding upstream 653054 25265882 ~ 25266098 (+)
G2312007 NA non-coding downstream 25571 25945371 ~ 25945583 (+)
G2312029 NA non-coding downstream 41126 25960926 ~ 25961267 (+)
G2312032 NA non-coding downstream 47195 25966995 ~ 25967314 (+)
G2312033 NA non-coding downstream 48353 25968153 ~ 25968357 (+)
G2312035 LOC100380853 non-coding downstream 51090 25970890 ~ 25971121 (+)
G2311528 NA other upstream 182305 25735194 ~ 25736847 (+)
LOC110488142 LOC106570295 other upstream 1761716 24151527 ~ 24157473 (+)
LOC110488133 NA other upstream 1938373 23979350 ~ 23981983 (+)
G2308224 NA other upstream 3314431 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 3502860 22405971 ~ 22416346 (+)
G2312300 NA other downstream 405352 26325152 ~ 26325383 (+)
G2312752 NA other downstream 813504 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 896884 26816398 ~ 26820899 (+)
G2312933 NA other downstream 1113999 27033799 ~ 27039185 (+)
LOC118946485 LOC106570234 other downstream 1278044 27197844 ~ 27202811 (+)

Expression


Co-expression Network