G2312032


Basic Information

Item Value
gene id G2312032
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 25966995 ~ 25967314 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2644636
ctgatccacctttcattttccatttgttttgtcttgtcttcccacacacctggtttcaagtccatcattacatgttgtgtatttaaccctctgttccccccatgtccttgtctggaattgtttgttgtagtgTTTGTGCACATTATGCTGGTGTGTAACGGGTTATGTACACCCATTCATTTATTGTTCTGTTTACGGTGGTTTTGTTTATTAAACTGCGCCTTTGTAAATCAGTTTTTGCTCtactgcgcctgacttctctgccgccagtatgcACCCCAgactatggagtcagcaggagcaggtaccccgggTATAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2644636 True 320 lncRNA 0.44 1 25966995 25967314

Neighbor

gene id symbol gene type direction distance location
LOC110489412 LOC106570261 coding upstream 182177 25496044 ~ 25784818 (+)
LOC110488172 LOC106570264 coding upstream 487059 25472441 ~ 25479936 (+)
LOC118946553 NA coding upstream 494464 25472396 ~ 25472531 (+)
LOC110488170 LOC106570265 coding upstream 505114 25459707 ~ 25461881 (+)
LOC110488169 ctps1 coding upstream 514399 25437558 ~ 25452596 (+)
LOC118946515 LOC106595335 coding downstream 80466 26047780 ~ 26052231 (+)
LOC110488177 LOC106595335 coding downstream 89539 26056853 ~ 26061300 (+)
LOC118946509 LOC106595335 coding downstream 98622 26065936 ~ 26070380 (+)
LOC118946546 LOC106595335 coding downstream 107778 26075092 ~ 26076796 (+)
LOC118946516 LOC106595335 coding downstream 109624 26076938 ~ 26079433 (+)
G2312029 NA non-coding upstream 5728 25960926 ~ 25961267 (+)
G2312007 NA non-coding upstream 21412 25945371 ~ 25945583 (+)
G2311897 NA non-coding upstream 98273 25868325 ~ 25868722 (+)
G2311880 NA non-coding upstream 120948 25845846 ~ 25846047 (+)
G2311875 NA non-coding upstream 123697 25843098 ~ 25843298 (+)
G2312033 NA non-coding downstream 839 25968153 ~ 25968357 (+)
G2312035 LOC100380853 non-coding downstream 3576 25970890 ~ 25971121 (+)
G2312038 NA non-coding downstream 6077 25973391 ~ 25973635 (+)
G2312052 NA non-coding downstream 24635 25991949 ~ 25992182 (+)
G2312012 NA non-coding downstream 28264 25995578 ~ 26000631 (+)
G2311978 NA other upstream 47195 25919152 ~ 25919800 (+)
G2311528 NA other upstream 230148 25735194 ~ 25736847 (+)
LOC110488142 LOC106570295 other upstream 1809559 24151527 ~ 24157473 (+)
LOC110488133 NA other upstream 1986216 23979350 ~ 23981983 (+)
G2308224 NA other upstream 3362274 22604320 ~ 22604721 (+)
G2312300 NA other downstream 357838 26325152 ~ 26325383 (+)
G2312752 NA other downstream 765990 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 849370 26816398 ~ 26820899 (+)
G2312933 NA other downstream 1066485 27033799 ~ 27039185 (+)
LOC118946485 LOC106570234 other downstream 1230530 27197844 ~ 27202811 (+)

Expression


Co-expression Network