G2312035 (LOC100380853)


Basic Information

Item Value
gene id G2312035
gene name LOC100380853
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 25970890 ~ 25971121 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2644639
ggtctggctctcgaccctccacctgctcctccacctgccctgccggatgctgggtccgcggtttgtggagccatttaaagtcctgaggagagtgaacgaggtttgttataggttacagcttcccccagattaccgtattaacccctcgttccatgtgtctctcctcaggccggtggtggctggtccgctccaggagtctgaggtgcgggaggttcctccatcccctctggac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2644639 True 232 lncRNA 0.59 1 25970890 25971121

Neighbor

gene id symbol gene type direction distance location
LOC110489412 LOC106570261 coding upstream 186072 25496044 ~ 25784818 (+)
LOC110488172 LOC106570264 coding upstream 490954 25472441 ~ 25479936 (+)
LOC118946553 NA coding upstream 498359 25472396 ~ 25472531 (+)
LOC110488170 LOC106570265 coding upstream 509009 25459707 ~ 25461881 (+)
LOC110488169 ctps1 coding upstream 518294 25437558 ~ 25452596 (+)
LOC118946515 LOC106595335 coding downstream 76659 26047780 ~ 26052231 (+)
LOC110488177 LOC106595335 coding downstream 85732 26056853 ~ 26061300 (+)
LOC118946509 LOC106595335 coding downstream 94815 26065936 ~ 26070380 (+)
LOC118946546 LOC106595335 coding downstream 103971 26075092 ~ 26076796 (+)
LOC118946516 LOC106595335 coding downstream 105817 26076938 ~ 26079433 (+)
G2312033 NA non-coding upstream 2533 25968153 ~ 25968357 (+)
G2312032 NA non-coding upstream 3576 25966995 ~ 25967314 (+)
G2312029 NA non-coding upstream 9623 25960926 ~ 25961267 (+)
G2312007 NA non-coding upstream 25307 25945371 ~ 25945583 (+)
G2311897 NA non-coding upstream 102168 25868325 ~ 25868722 (+)
G2312038 NA non-coding downstream 2270 25973391 ~ 25973635 (+)
G2312052 NA non-coding downstream 20828 25991949 ~ 25992182 (+)
G2312012 NA non-coding downstream 24457 25995578 ~ 26000631 (+)
G2312014 NA non-coding downstream 32075 26003196 ~ 26003637 (+)
G2312062 NA non-coding downstream 43707 26014828 ~ 26015032 (+)
G2311978 NA other upstream 51090 25919152 ~ 25919800 (+)
G2311528 NA other upstream 234043 25735194 ~ 25736847 (+)
LOC110488142 LOC106570295 other upstream 1813454 24151527 ~ 24157473 (+)
LOC110488133 NA other upstream 1990111 23979350 ~ 23981983 (+)
G2308224 NA other upstream 3366169 22604320 ~ 22604721 (+)
G2312300 NA other downstream 354031 26325152 ~ 26325383 (+)
G2312752 NA other downstream 762183 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 845563 26816398 ~ 26820899 (+)
G2312933 NA other downstream 1062678 27033799 ~ 27039185 (+)
LOC118946485 LOC106570234 other downstream 1226723 27197844 ~ 27202811 (+)

Expression


Co-expression Network