G2312561


Basic Information

Item Value
gene id G2312561
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 26442627 ~ 26443584 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2645209
AAGCACACATGAGAGAAATGAGAACTGTCGTTGGCACATGTGACACATACAACagtaacccttaacccctaatcgTATCTTTATGTCCACATCCCGTCTCAAAaataaccataaccctagcttcatgtccacaccccgggtcaaccctaaccctagccatgACCCGAACCTTAACTCTAACTTGGAATAACCGTAAACCTAGCTTTAAATAGTAACCACTCAAAATAGGCATCCCCGCCTCACCTCTGCTTAAAAAGCCTCTCTACCTTGCATGTGCAAAACTATCTGACCGTCATTTCACTCTGTCACCCTTCGCTCTCATTGAATAATCCAATTATTTGAATCTCAATTGAATTCCAATCAGTTTTAGTTTTATCAAGGTACACTTGATACACTGTATATGTCTTAAGAATGTGGGTCTTGATCAGGGTCAGACCAGTCTTGATCAGGGTCAGACCAGTCTTGACTCATACTTGCTTGAATTACAAAAATGGAACAGAGTTTTCTCTTTCTGTGAACAACAGTAACAGGCGGCCAGATAGCTATATCCTTGGCATATGCCTAACTCAGGTCCATTCTCTCTGGGgttgggtctgggtctggggctGTAGTTCACACACATGTCCTTGAAATAGCCAAAGTATAACTGCAAAACAAGGTTTTCTCTTGCTGTTTCCGACAATAAGTGCCAGATATAAATGCCAGGCTGAGGCAACTGGCAGGTGGACACAAGTGAGAAAAAGGAAACTGACACAATTACAGCTCTACAAGGTAACACAACCTGGATTACCCATGGATCACATCAAAACCTCTCAGATAAACCCCAGTATTTCATTGGCTATTAGAGAGAGTCAAACGGATCATGTTCTTGTGGGGGCAGAGGATAGTAATGAGGTCTTTAAAGGCTAATCAGTGATATTTACAGCCATTTGTGTTCATTTATATTCCTGATTGATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2645209 True 958 lncRNA 0.42 1 26442627 26443584

Neighbor

gene id symbol gene type direction distance location
LOC110488181 LOC106570268 coding upstream 178593 26221688 ~ 26264034 (+)
LOC110488180 LOC106570254 coding upstream 265669 26172338 ~ 26176958 (+)
LOC110488179 LOC106570255 coding upstream 275274 26124479 ~ 26167353 (+)
serinc2 LOC106570256 coding upstream 332879 26092544 ~ 26109748 (+)
LOC118946516 LOC106595335 coding upstream 363194 26076938 ~ 26079433 (+)
LOC110488183 LOC106570248 coding downstream 52747 26496331 ~ 26509065 (+)
LOC110488188 LOC106570251 coding downstream 270527 26714111 ~ 26716280 (+)
LOC110488189 NA coding downstream 304358 26747942 ~ 26750163 (+)
LOC110488192 LOC106570240 coding downstream 358455 26802039 ~ 26810237 (+)
LOC110488193 LOC106570239 coding downstream 372814 26816398 ~ 26820899 (+)
G2312554 NA non-coding upstream 10253 26432160 ~ 26432374 (+)
G2312531 NA non-coding upstream 47505 26393820 ~ 26395122 (+)
G2312518 NA non-coding upstream 69566 26372853 ~ 26373061 (+)
G2312514 NA non-coding upstream 77415 26364991 ~ 26365212 (+)
G2312314 NA non-coding upstream 103806 26338529 ~ 26338821 (+)
G2312619 NA non-coding downstream 75117 26518701 ~ 26519954 (+)
G2312628 NA non-coding downstream 89670 26533254 ~ 26533466 (+)
G2312631 NA non-coding downstream 96522 26540106 ~ 26540335 (+)
G2312635 NA non-coding downstream 101672 26545256 ~ 26545572 (+)
G2312650 NA non-coding downstream 119814 26563398 ~ 26563701 (+)
G2312300 NA other upstream 117244 26325152 ~ 26325383 (+)
G2311978 NA other upstream 522827 25919152 ~ 25919800 (+)
G2311528 NA other upstream 705780 25735194 ~ 25736847 (+)
LOC110488142 LOC106570295 other upstream 2285191 24151527 ~ 24157473 (+)
LOC110488133 NA other upstream 2461848 23979350 ~ 23981983 (+)
G2312752 NA other downstream 289720 26733304 ~ 26733645 (+)
G2312933 NA other downstream 590215 27033799 ~ 27039185 (+)
LOC118946485 LOC106570234 other downstream 754260 27197844 ~ 27202811 (+)
G2313197 NA other downstream 1049515 27493099 ~ 27493735 (+)

Expression


Co-expression Network