Gene
RNA
| Item | Value |
|---|---|
| gene id | G2313457 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 27903384 ~ 27903946 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2646172 | True | 249 | lncRNA | 0.59 | 2 | 27903384 | 27903946 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488198 | LOC106570221 | coding | upstream | 39565 | 27848227 ~ 27863819 (+) |
| parp10 | LOC106588595 | coding | upstream | 55325 | 27836662 ~ 27848059 (+) |
| LOC110488197 | LOC106570220 | coding | upstream | 70329 | 27800567 ~ 27833055 (+) |
| LOC118946492 | NA | coding | upstream | 367075 | 27535951 ~ 27536309 (+) |
| LOC110489415 | LOC106570218 | coding | upstream | 527802 | 27316604 ~ 27375582 (+) |
| kcng2 | LOC106570224 | coding | downstream | 112620 | 28016566 ~ 28047334 (+) |
| LOC110488207 | NA | coding | downstream | 179409 | 28083355 ~ 28091830 (+) |
| LOC110488210 | LOC106570183 | coding | downstream | 395739 | 28299685 ~ 28384888 (+) |
| LOC110488215 | LOC106570189 | coding | downstream | 532120 | 28436066 ~ 28437991 (+) |
| LOC110488216 | LOC106570190 | coding | downstream | 564804 | 28468750 ~ 28471360 (+) |
| G2313263 | LOC106570219 | non-coding | upstream | 250298 | 27590483 ~ 27653086 (+) |
| G2313195 | NA | non-coding | upstream | 412112 | 27489728 ~ 27491272 (+) |
| G2313185 | NA | non-coding | upstream | 429562 | 27473518 ~ 27473822 (+) |
| G2313129 | NA | non-coding | upstream | 517965 | 27384832 ~ 27385419 (+) |
| G2313589 | NA | non-coding | downstream | 212483 | 28116429 ~ 28121278 (+) |
| G2313584 | NA | non-coding | downstream | 217511 | 28121457 ~ 28152260 (+) |
| G2314670 | NA | non-coding | downstream | 295862 | 28199808 ~ 28200038 (+) |
| G2314676 | NA | non-coding | downstream | 299695 | 28203641 ~ 28203860 (+) |
| G2313197 | NA | other | upstream | 409649 | 27493099 ~ 27493735 (+) |
| LOC118946485 | LOC106570234 | other | upstream | 700573 | 27197844 ~ 27202811 (+) |
| G2312933 | NA | other | upstream | 864199 | 27033799 ~ 27039185 (+) |
| LOC110488193 | LOC106570239 | other | upstream | 1082488 | 26816398 ~ 26820899 (+) |
| G2312752 | NA | other | upstream | 1169739 | 26733304 ~ 26733645 (+) |
| G2314887 | NA | other | downstream | 616309 | 28520255 ~ 28563595 (+) |
| G2314987 | NA | other | downstream | 794794 | 28698740 ~ 28703424 (+) |
| G2316421 | NA | other | downstream | 2018438 | 29922384 ~ 29931480 (+) |
| tmem79a | LOC106569868 | other | downstream | 2914082 | 30817937 ~ 30822555 (+) |
