Gene
RNA
| Item | Value |
|---|---|
| gene id | G2313584 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 28121457 ~ 28152260 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2646327 | True | 428 | lncRNA | 0.32 | 2 | 28121457 | 28152260 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488207 | NA | coding | upstream | 29627 | 28083355 ~ 28091830 (+) |
| kcng2 | LOC106570224 | coding | upstream | 76869 | 28016566 ~ 28047334 (+) |
| LOC110488200 | LOC106570222 | coding | upstream | 125334 | 27872161 ~ 27996123 (+) |
| LOC110488198 | LOC106570221 | coding | upstream | 257638 | 27848227 ~ 27863819 (+) |
| parp10 | LOC106588595 | coding | upstream | 273398 | 27836662 ~ 27848059 (+) |
| LOC110488210 | LOC106570183 | coding | downstream | 147425 | 28299685 ~ 28384888 (+) |
| LOC110488215 | LOC106570189 | coding | downstream | 283806 | 28436066 ~ 28437991 (+) |
| LOC110488216 | LOC106570190 | coding | downstream | 316490 | 28468750 ~ 28471360 (+) |
| LOC110489419 | ssr2 | coding | downstream | 830928 | 28983188 ~ 28994465 (+) |
| LOC110489420 | LOC106570197 | coding | downstream | 865301 | 29017561 ~ 29042431 (+) |
| G2313589 | NA | non-coding | upstream | 179 | 28116429 ~ 28121278 (+) |
| G2313453 | NA | non-coding | upstream | 160042 | 27896463 ~ 27961415 (+) |
| G2313457 | NA | non-coding | upstream | 217511 | 27903384 ~ 27903946 (+) |
| LOC110488197 | LOC106570220 | non-coding | upstream | 288759 | 27800567 ~ 27833055 (+) |
| G2314670 | NA | non-coding | downstream | 47548 | 28199808 ~ 28200038 (+) |
| G2314676 | NA | non-coding | downstream | 51381 | 28203641 ~ 28203860 (+) |
| G2314677 | NA | non-coding | downstream | 62212 | 28214472 ~ 28214740 (+) |
| G2314719 | NA | non-coding | downstream | 119475 | 28271735 ~ 28272381 (+) |
| G2314739 | NA | non-coding | downstream | 140031 | 28292291 ~ 28292543 (+) |
| G2313197 | NA | other | upstream | 627722 | 27493099 ~ 27493735 (+) |
| LOC118946485 | LOC106570234 | other | upstream | 918646 | 27197844 ~ 27202811 (+) |
| G2312933 | NA | other | upstream | 1082272 | 27033799 ~ 27039185 (+) |
| LOC110488193 | LOC106570239 | other | upstream | 1300561 | 26816398 ~ 26820899 (+) |
| G2314887 | NA | other | downstream | 367995 | 28520255 ~ 28563595 (+) |
| G2314987 | NA | other | downstream | 546480 | 28698740 ~ 28703424 (+) |
| G2316421 | NA | other | downstream | 1770124 | 29922384 ~ 29931480 (+) |
| tmem79a | LOC106569868 | other | downstream | 2665768 | 30817937 ~ 30822555 (+) |
| G2317455 | NA | other | downstream | 2681470 | 30833730 ~ 30835101 (+) |
