G2314802


Basic Information

Item Value
gene id G2314802
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 28403246 ~ 28403552 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2647673
AGAacatcccttagccgtggtatattggccatatatcacaccccctcgggccttattgcttaagtaactCATATTTGAAACACATTTATCGACAATTAACAGATTGTGCAAGATGgatgtcttcctcctcctccttcttgcaGCGTTCTCAAGGCCGATGGACAACCAGTGCTAACCCAGCACTAActgttcctgttctgttctaTGTCCTGTCCtatctctgtcctgtcctatCTCTGTCCTGTCCTAACTCTGTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2647673 True 259 lncRNA 0.46 2 28403246 28403552

Neighbor

gene id symbol gene type direction distance location
LOC110488210 LOC106570183 coding upstream 18358 28299685 ~ 28384888 (+)
LOC110488207 NA coding upstream 311416 28083355 ~ 28091830 (+)
kcng2 LOC106570224 coding upstream 358658 28016566 ~ 28047334 (+)
LOC110488200 LOC106570222 coding upstream 407123 27872161 ~ 27996123 (+)
LOC110488198 LOC106570221 coding upstream 539427 27848227 ~ 27863819 (+)
LOC110488215 LOC106570189 coding downstream 32514 28436066 ~ 28437991 (+)
LOC110488216 LOC106570190 coding downstream 65198 28468750 ~ 28471360 (+)
LOC110489419 ssr2 coding downstream 579636 28983188 ~ 28994465 (+)
LOC110489420 LOC106570197 coding downstream 614009 29017561 ~ 29042431 (+)
LOC110488225 LOC106588560 coding downstream 766287 29169839 ~ 29271629 (+)
G2314739 NA non-coding upstream 110703 28292291 ~ 28292543 (+)
G2314719 NA non-coding upstream 130865 28271735 ~ 28272381 (+)
G2314677 NA non-coding upstream 188506 28214472 ~ 28214740 (+)
G2314676 NA non-coding upstream 199386 28203641 ~ 28203860 (+)
G2314830 LOC106570188 non-coding downstream 34455 28438007 ~ 28442117 (+)
G2314883 NA non-coding downstream 112900 28516452 ~ 28553988 (+)
G2314975 NA non-coding downstream 259284 28662836 ~ 28788903 (+)
G2314988 NA non-coding downstream 298455 28702007 ~ 28708584 (+)
G2315279 NA non-coding downstream 391288 28794840 ~ 28795053 (+)
G2313197 NA other upstream 909511 27493099 ~ 27493735 (+)
LOC118946485 LOC106570234 other upstream 1200435 27197844 ~ 27202811 (+)
G2312933 NA other upstream 1364061 27033799 ~ 27039185 (+)
LOC110488193 LOC106570239 other upstream 1582350 26816398 ~ 26820899 (+)
G2314887 NA other downstream 116703 28520255 ~ 28563595 (+)
G2314987 NA other downstream 295188 28698740 ~ 28703424 (+)
G2316421 NA other downstream 1518832 29922384 ~ 29931480 (+)
tmem79a LOC106569868 other downstream 2414476 30817937 ~ 30822555 (+)
G2317455 NA other downstream 2430178 30833730 ~ 30835101 (+)

Expression


Co-expression Network