Gene
RNA
| Item | Value |
|---|---|
| gene id | G2314988 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 28702007 ~ 28708584 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2647882 | True | 278 | lncRNA | 0.53 | 3 | 28702007 | 28708584 |
28,699,000
28,700,000
28,701,000
28,702,000
28,703,000
28,704,000
28,705,000
28,706,000
28,707,000
28,708,000
28,708,000
28,709,000
28,710,000
28,711,000
28,712,000
28,713,000
28,714,000
28,715,000
28,716,000
NC_050572.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488216 | LOC106570190 | coding | upstream | 230647 | 28468750 ~ 28471360 (+) |
| LOC110488215 | LOC106570189 | coding | upstream | 264016 | 28436066 ~ 28437991 (+) |
| LOC110488210 | LOC106570183 | coding | upstream | 317119 | 28299685 ~ 28384888 (+) |
| LOC110488207 | NA | coding | upstream | 610177 | 28083355 ~ 28091830 (+) |
| kcng2 | LOC106570224 | coding | upstream | 657419 | 28016566 ~ 28047334 (+) |
| LOC110489419 | ssr2 | coding | downstream | 274604 | 28983188 ~ 28994465 (+) |
| LOC110489420 | LOC106570197 | coding | downstream | 308977 | 29017561 ~ 29042431 (+) |
| LOC110488225 | LOC106588560 | coding | downstream | 461255 | 29169839 ~ 29271629 (+) |
| LOC110488226 | rpc7l | coding | downstream | 507052 | 29215636 ~ 29223759 (+) |
| LOC118946464 | NA | coding | downstream | 657843 | 29366427 ~ 29369552 (+) |
| G2314883 | NA | non-coding | upstream | 148019 | 28516452 ~ 28553988 (+) |
| G2314830 | LOC106570188 | non-coding | upstream | 259890 | 28438007 ~ 28442117 (+) |
| G2314802 | NA | non-coding | upstream | 298455 | 28403246 ~ 28403552 (+) |
| G2314739 | NA | non-coding | upstream | 409464 | 28292291 ~ 28292543 (+) |
| G2315279 | NA | non-coding | downstream | 86256 | 28794840 ~ 28795053 (+) |
| G2315294 | NA | non-coding | downstream | 98394 | 28806978 ~ 28807196 (+) |
| G2315302 | NA | non-coding | downstream | 101656 | 28810240 ~ 28810537 (+) |
| G2315304 | NA | non-coding | downstream | 102200 | 28810784 ~ 28811014 (+) |
| G2315306 | NA | non-coding | downstream | 104370 | 28812954 ~ 28813283 (+) |
| G2314887 | NA | other | upstream | 138412 | 28520255 ~ 28563595 (+) |
| G2313197 | NA | other | upstream | 1208272 | 27493099 ~ 27493735 (+) |
| LOC118946485 | LOC106570234 | other | upstream | 1499196 | 27197844 ~ 27202811 (+) |
| G2312933 | NA | other | upstream | 1662822 | 27033799 ~ 27039185 (+) |
| G2316421 | NA | other | downstream | 1213800 | 29922384 ~ 29931480 (+) |
| tmem79a | LOC106569868 | other | downstream | 2109444 | 30817937 ~ 30822555 (+) |
| G2317455 | NA | other | downstream | 2125146 | 30833730 ~ 30835101 (+) |
| G2317562 | LOC100196669 | other | downstream | 2389035 | 31097619 ~ 31127687 (+) |
| G2317685 | LOC106569887 | other | downstream | 2513533 | 31222117 ~ 31223562 (+) |
