Gene
RNA
| Item | Value |
|---|---|
| gene id | G2315312 |
| gene name | LOC106562530 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 28815835 ~ 28816121 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2648230 | True | 287 | lncRNA | 0.59 | 1 | 28815835 | 28816121 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488216 | LOC106570190 | coding | upstream | 344475 | 28468750 ~ 28471360 (+) |
| LOC110488215 | LOC106570189 | coding | upstream | 377844 | 28436066 ~ 28437991 (+) |
| LOC110488210 | LOC106570183 | coding | upstream | 430947 | 28299685 ~ 28384888 (+) |
| LOC110488207 | NA | coding | upstream | 724005 | 28083355 ~ 28091830 (+) |
| kcng2 | LOC106570224 | coding | upstream | 771247 | 28016566 ~ 28047334 (+) |
| LOC110489419 | ssr2 | coding | downstream | 167067 | 28983188 ~ 28994465 (+) |
| LOC110489420 | LOC106570197 | coding | downstream | 201440 | 29017561 ~ 29042431 (+) |
| LOC110488225 | LOC106588560 | coding | downstream | 353718 | 29169839 ~ 29271629 (+) |
| LOC110488226 | rpc7l | coding | downstream | 399515 | 29215636 ~ 29223759 (+) |
| LOC118946464 | NA | coding | downstream | 550306 | 29366427 ~ 29369552 (+) |
| G2315306 | NA | non-coding | upstream | 2552 | 28812954 ~ 28813283 (+) |
| G2315304 | NA | non-coding | upstream | 4821 | 28810784 ~ 28811014 (+) |
| G2315302 | NA | non-coding | upstream | 5298 | 28810240 ~ 28810537 (+) |
| G2315294 | NA | non-coding | upstream | 8639 | 28806978 ~ 28807196 (+) |
| G2315279 | NA | non-coding | upstream | 20782 | 28794840 ~ 28795053 (+) |
| G2315320 | NA | non-coding | downstream | 5049 | 28821170 ~ 28821499 (+) |
| G2315322 | NA | non-coding | downstream | 5833 | 28821954 ~ 28822265 (+) |
| G2315335 | NA | non-coding | downstream | 15732 | 28831853 ~ 28832080 (+) |
| G2315355 | NA | non-coding | downstream | 27901 | 28844022 ~ 28844255 (+) |
| G2315380 | NA | non-coding | downstream | 39724 | 28855845 ~ 28885284 (+) |
| G2314987 | NA | other | upstream | 112411 | 28698740 ~ 28703424 (+) |
| G2314887 | NA | other | upstream | 252240 | 28520255 ~ 28563595 (+) |
| G2313197 | NA | other | upstream | 1322100 | 27493099 ~ 27493735 (+) |
| LOC118946485 | LOC106570234 | other | upstream | 1613024 | 27197844 ~ 27202811 (+) |
| G2316421 | NA | other | downstream | 1106263 | 29922384 ~ 29931480 (+) |
| tmem79a | LOC106569868 | other | downstream | 2001907 | 30817937 ~ 30822555 (+) |
| G2317455 | NA | other | downstream | 2017609 | 30833730 ~ 30835101 (+) |
| G2317562 | LOC100196669 | other | downstream | 2281498 | 31097619 ~ 31127687 (+) |
| G2317685 | LOC106569887 | other | downstream | 2405996 | 31222117 ~ 31223562 (+) |
