G2315393


Basic Information

Item Value
gene id G2315393
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 28891069 ~ 28891287 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2648320
CCTGACAATTATCAAGAGCAGCTTCTCACTGATTTTCCAACTCCAAGCAGTTAcactggggaggcaggtagcctagcggtcagagcgttgggccagtaaccgaaaggttgctggaactaatcctcgagctgacaaggtaaaaatctgtcattctgcccctgaaaaaggcagttaacccactgttccccggtaggccgtcattgtaaataagaatgtgtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2648320 True 219 lncRNA 0.48 1 28891069 28891287

Neighbor

gene id symbol gene type direction distance location
LOC110488216 LOC106570190 coding upstream 419709 28468750 ~ 28471360 (+)
LOC110488215 LOC106570189 coding upstream 453078 28436066 ~ 28437991 (+)
LOC110488210 LOC106570183 coding upstream 506181 28299685 ~ 28384888 (+)
LOC110488207 NA coding upstream 799239 28083355 ~ 28091830 (+)
kcng2 LOC106570224 coding upstream 846481 28016566 ~ 28047334 (+)
LOC110489419 ssr2 coding downstream 91901 28983188 ~ 28994465 (+)
LOC110489420 LOC106570197 coding downstream 126274 29017561 ~ 29042431 (+)
LOC110488225 LOC106588560 coding downstream 278552 29169839 ~ 29271629 (+)
LOC110488226 rpc7l coding downstream 324349 29215636 ~ 29223759 (+)
LOC118946464 NA coding downstream 475140 29366427 ~ 29369552 (+)
G2315380 NA non-coding upstream 5785 28855845 ~ 28885284 (+)
G2315371 NA non-coding upstream 26494 28860825 ~ 28864575 (+)
G2315355 NA non-coding upstream 46814 28844022 ~ 28844255 (+)
G2315335 NA non-coding upstream 58989 28831853 ~ 28832080 (+)
G2315322 NA non-coding upstream 68804 28821954 ~ 28822265 (+)
G2315517 NA non-coding downstream 117456 29008743 ~ 29008952 (+)
G2315522 NA non-coding downstream 123297 29014584 ~ 29014872 (+)
G2315529 NA non-coding downstream 125827 29017114 ~ 29017393 (+)
G2315552 NA non-coding downstream 144412 29035699 ~ 29035919 (+)
G2314987 NA other upstream 187645 28698740 ~ 28703424 (+)
G2314887 NA other upstream 327474 28520255 ~ 28563595 (+)
G2313197 NA other upstream 1397334 27493099 ~ 27493735 (+)
LOC118946485 LOC106570234 other upstream 1688258 27197844 ~ 27202811 (+)
G2316421 NA other downstream 1031097 29922384 ~ 29931480 (+)
tmem79a LOC106569868 other downstream 1926741 30817937 ~ 30822555 (+)
G2317455 NA other downstream 1942443 30833730 ~ 30835101 (+)
G2317562 LOC100196669 other downstream 2206332 31097619 ~ 31127687 (+)
G2317685 LOC106569887 other downstream 2330830 31222117 ~ 31223562 (+)

Expression


Co-expression Network